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research article

Deriving physical connectivity from neuronal morphology

Kalisman, N.
•
Silberberg, G.  
•
Markram, H.  
2003
Biol Cybern

A model is presented that allows prediction of the probability for the formation of appositions between the axons and dendrites of any two neurons based only on their morphological statistics and relative separation. Statistics of axonal and dendritic morphologies of single neurons are obtained from 3D reconstructions of biocytin-filled cells, and a statistical representation of the same cell type is obtained by averaging across neurons according to the model. A simple mathematical formulation is applied to the axonal and dendritic statistical representations to yield the probability for close appositions. The model is validated by a mathematical proof and by comparison of predicted appositions made by layer 5 pyramidal neurons in the rat somatosensory cortex with real anatomical data. The model could be useful for studying microcircuit connectivity and for designing artificial neural networks.

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Type
research article
DOI
10.1007/s00422-002-0377-3
Web of Science ID

WOS:000182461500005

PubMed ID

12647228

Author(s)
Kalisman, N.
Silberberg, G.  
Markram, H.  
Date Issued

2003

Published in
Biol Cybern
Volume

88

Issue

3

Start page

210

End page

8

Note

Department of Neurobiology, Weizmann Institute of Science, Rehovot 76100, Israel.

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LNMC  
Available on Infoscience
February 27, 2008
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/19345
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