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  4. Landscape Genomics: Understanding Relationships Between Environmental Heterogeneity and Genomic Characteristics of Populations
 
book part or chapter

Landscape Genomics: Understanding Relationships Between Environmental Heterogeneity and Genomic Characteristics of Populations

Balkenhol, Niko
•
Dudaniec, Rachael Y.
•
Krutovsky, Konstantin V.
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Rajora, O.P.
2019
Population Genomics: Concepts, Strategies, and Applications

Landscape genomics is a rapidly advancing research field that combines population genomics, landscape ecology, and spatial analytical techniques to explicitly quantify the effects of environmental heterogeneity on neutral and adaptive genetic variation and underlying processes. Landscape genomics has tremendous potential for addressing fundamental and applied research questions in various research fields, including ecology, evolution, and conservation biology. However, the unique combination of different scientific disciplines and analytical approaches also constitute a challenge to most researchers wishing to apply landscape genomics. Here, we present an introductory overview of important concepts and methods used in current landscape genomics. For this, we first define the field and explain basic concepts and methods to capture different hypotheses of landscape influences on neutral genetic variation. Next, we highlight established and emerging genomic tools for quantifying adaptive genetic variation in landscape genomic studies. To illustrate the covered topics and to demonstrate the potential of landscape genomics, we provide empirical examples addressing a variety of research question, i.e., the investigation of evolutionary processes driving population differentiation, the landscape genomics of range expanding species, and landscape genomic patterns in organisms of special interest, including species inhabiting aquatic and terrestrial environments. We conclude by outlining remaining challenges and future research avenues in landscape genomics.

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Type
book part or chapter
DOI
10.1007/13836_2017_2
Author(s)
Balkenhol, Niko
Dudaniec, Rachael Y.
Krutovsky, Konstantin V.
Johnson, Jeremy S.
Cairns, David M.
Segelbacher, Gernot
Selkoe, Kimberly A.
von der Heyden, Sophie
Wang, Ian J.
Selmoni, Oliver  
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Editors
Rajora, O.P.
Date Issued

2019

Publisher

Springer

Publisher place

Cham

Published in
Population Genomics: Concepts, Strategies, and Applications
Total of pages

1-62

Start page

261

End page

322

Series title/Series vol.

Population Genomics

Subjects

Adaptive landscape genetics

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Environmental association analysis (EAA)

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Functional connectivity

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Genome-wide association studies (GWAS)

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Genotype-environment association (GEA)

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Landscape resistance

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Local adaptation

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Outlier loci

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Seascape genomics

Written at

EPFL

EPFL units
LASIG  
Available on Infoscience
February 8, 2018
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/144700
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