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  4. A calcium-based plasticity model for predicting long-term potentiation and depression in the neocortex
 
research article

A calcium-based plasticity model for predicting long-term potentiation and depression in the neocortex

Chindemi, Giuseppe  
•
Abdellah, Marwan  
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Amsalem, Oren
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June 1, 2022
Nature Communications

Pyramidal cells (PCs) form the backbone of the layered structure of the neocortex, and plasticity of their synapses is thought to underlie learning in the brain. However, such long-term synaptic changes have been experimentally characterized between only a few types of PCs, posing a significant barrier for studying neocortical learning mechanisms. Here we introduce a model of synaptic plasticity based on data-constrained postsynaptic calcium dynamics, and show in a neocortical microcircuit model that a single parameter set is sufficient to unify the available experimental findings on long-term potentiation (LTP) and long-term depression (LTD) of PC connections. In particular, we find that the diverse plasticity outcomes across the different PC types can be explained by cell-type-specific synaptic physiology, cell morphology and innervation patterns, without requiring type-specific plasticity. Generalizing the model to in vivo extracellular calcium concentrations, we predict qualitatively different plasticity dynamics from those observed in vitro. This work provides a first comprehensive null model for LTP/LTD between neocortical PC types in vivo, and an open framework for further developing models of cortical synaptic plasticity.

The study of learning algorithms in the neocortex requires comprehensive knowledge of synaptic plasticity between its diverse cell types, which is currently lacking. Chindemi et al. describe a modeling approach to fill these gaps in experimental literature, and predict the features of synaptic plasticity in vivo.

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Type
research article
DOI
10.1038/s41467-022-30214-w
Web of Science ID

WOS:000804921800013

Author(s)
Chindemi, Giuseppe  
Abdellah, Marwan  
Amsalem, Oren
Benavides-Piccione, Ruth
Delattre, Vincent  
Doron, Michael
Ecker, Andras  
Jaquier, Aurelien T.  
King, James  
Kumbhar, Pramod  
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Date Issued

2022-06-01

Publisher

Nature Portfolio

Published in
Nature Communications
Volume

13

Issue

1

Article Number

3038

Subjects

Multidisciplinary Sciences

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Science & Technology - Other Topics

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timing-dependent plasticity

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synaptic plasticity

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pyramidal neurons

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presynaptic nmda

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apical dendrites

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rat hippocampus

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ltd

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expression

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efficacy

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spikes

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LNMC  
BBP-CORE  
Available on Infoscience
June 20, 2022
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/188699
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