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  4. Temperature regulates splicing efficiency of the cold-inducible RNA-binding protein gene Cirbp
 
research article

Temperature regulates splicing efficiency of the cold-inducible RNA-binding protein gene Cirbp

Gotic, Ivana
•
Omidi, Saeed
•
Fleury-Olela, Fabienne
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September 1, 2016
Genes & Development

In mammals, body temperature fluctuates diurnally around a mean value of 36 degrees C-37 degrees C. Despite the small differences between minimal and maximal values, body temperature rhythms can drive robust cycles in gene expression in cultured cells and, likely, animals. Here we studied the mechanisms responsible for the temperature dependent expression of cold-inducible RNA-binding protein (CIRBP). In NIH3T3 fibroblasts exposed to simulated mouse body temperature cycles, Cirbp mRNA oscillates about threefold in abundance, as it does in mouse livers. This daily mRNA accumulation cycle is directly controlled by temperature oscillations and does not depend on the cells' circadian clocks. Here we show that the temperature-dependent accumulation of Cirbp mRNA is controlled primarily by the regulation of splicing efficiency, defined as the fraction of Cirbp pre-mRNA processed into mature mRNA. As revealed by genome-wide "approach to steady-state" kinetics, this post-transcriptional mechanism is widespread in the temperature-dependent control of gene expression.

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Type
research article
DOI
10.1101/gad.287094.116
Web of Science ID

WOS:000384964600010

Author(s)
Gotic, Ivana
Omidi, Saeed
Fleury-Olela, Fabienne
Molina, Nacho
Naef, Felix  
Schibler, Ueli
Date Issued

2016-09-01

Publisher

Cold Spring Harbor Laboratory

Published in
Genes & Development
Volume

30

Issue

17

Start page

2005

End page

2017

Subjects

Cirbp

•

splicing efficiency

•

temperature

•

circadian rhythms

Note

This article is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPNAE  
Available on Infoscience
November 21, 2016
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/131494
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