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  4. Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors
 
research article

Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors

Hines, Michael L.
•
Eichner, Hubert
•
Schuermann, Felix  
2008
Journal Of Computational Neuroscience

Neuron tree topology equations can be split into two subtrees and solved on different processors with no change in accuracy, stability, or computational effort; communication costs involve only sending and receiving two double precision values by each subtree at each time step. Splitting cells is useful in attaining load balance in neural network simulations, especially when there is a wide range of cell sizes and the number of cells is about the same as the number of processors. For compute-bound simulations load balance results in almost ideal runtime scaling. Application of the cell splitting method to two published network models exhibits good runtime scaling on twice as many processors as could be effectively used with whole-cell balancing.

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Type
research article
DOI
10.1007/s10827-007-0073-3
Web of Science ID

WOS:000256824500012

Author(s)
Hines, Michael L.
Eichner, Hubert
Schuermann, Felix  
Date Issued

2008

Published in
Journal Of Computational Neuroscience
Volume

25

Start page

203

End page

210

Subjects

computer simulation

•

computer modeling

•

neuronal networks

•

load balance

•

parallel simulation

•

Model

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
GR-FSCH  
BBP-CORE  
Available on Infoscience
November 30, 2010
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/61298
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