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research article

Fast viral dynamics revealed by microsecond time-resolved cryo-EM

Harder, Oliver Florian  
•
Barrass, Sarah Victoria  
•
Drabbels, Marcel  
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September 13, 2023
Nature Communications

Observing proteins as they perform their tasks has largely remained elusive, which has left our understanding of protein function fundamentally incom- plete. To enable such observations, we have recently proposed a technique that improves the time resolution of cryo-electron microscopy (cryo-EM) to microseconds. Here, we demonstrate that microsecond time-resolved cryo- EM enables observations of fast protein dynamics. We use our approach to elucidate the mechanics of the capsid of cowpea chlorotic mottle virus (CCMV), whose large-amplitude motions play a crucial role in the viral life cycle. We observe that a pH jump causes the extended configuration of the capsid to contract on the microsecond timescale. While this is a concerted process, the motions of the capsid proteins involve different timescales, leading to a curved reaction path. It is difficult to conceive how such a detailed picture of the dynamics could have been obtained with any other method, which highlights the potential of our technique. Crucially, our experiments pave the way for microsecond time-resolved cryo-EM to be applied to a broad range of protein dynamics that previously could not have been observed. This promises to fundamentally advance our understanding of protein function.

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Type
research article
DOI
10.1038/s41467-023-41444-x
Author(s)
Harder, Oliver Florian  
Barrass, Sarah Victoria  
Drabbels, Marcel  
Lorenz, Ulrich  
Date Issued

2023-09-13

Publisher

Nature Research

Published in
Nature Communications
Volume

14

Article Number

5649

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LND  
Available on Infoscience
September 14, 2023
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/200704
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