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research article

Generation and application of river network analogues for use in ecology and evolution

Carraro, Luca
•
Bertuzzo, Enrico
•
Fronhofer, Emanuel A.
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June 30, 2020
Ecology And Evolution

Several key processes in freshwater ecology are governed by the connectivity inherent to dendritic river networks. These have extensively been analyzed from a geomorphological and hydrological viewpoint, yet structures classically used in ecological modeling have been poorly representative of the structure of real river basins, often failing to capture well-known scaling features of natural rivers. Pioneering work identified optimal channel networks (OCNs) as spanning trees reproducing all scaling features characteristic of natural stream networks worldwide. While OCNs have been used to create landscapes for studies on metapopulations, biodiversity, and epidemiology, their generation has not been generally accessible. Given the increasing interest in dendritic riverine networks by ecologists and evolutionary biologists, we here present a method to generate OCNs and, to facilitate its application, we provide the R-packageOCNet. Owing to the stochastic process generating OCNs, multiple network replicas spanning the same surface can be built; this allows performing computational experiments whose results are irrespective of the particular shape of a single river network. The OCN construct also enables the generation of elevational gradients derived from the optimal network configuration, which can constitute three-dimensional landscapes for spatial studies in both terrestrial and freshwater realms. Moreover, the package provides functions that aggregate OCNs into an arbitrary number of nodes, calculate several descriptors of river networks, and draw relevant network features. We describe the main functionalities of the package and its integration with other R-packages commonly used in spatial ecology. Moreover, we exemplify the generation of OCNs and discuss an application to a metapopulation model for an invasive riverine species. In conclusion,OCNetprovides a powerful tool to generate realistic river network analogues for various applications. It thereby allows the design of spatially realistic studies in increasingly impacted ecosystems and enhances our knowledge on spatial processes in freshwater ecology in general.

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Type
research article
DOI
10.1002/ece3.6479
Web of Science ID

WOS:000548012700001

Author(s)
Carraro, Luca
Bertuzzo, Enrico
Fronhofer, Emanuel A.
Furrer, Reinhard
Gounand, Isabelle
Rinaldo, Andrea  
Altermatt, Florian
Date Issued

2020-06-30

Published in
Ecology And Evolution
Volume

10

Issue

14

Start page

7537

End page

7550

Subjects

Ecology

•

Evolutionary Biology

•

Environmental Sciences & Ecology

•

biodiversity

•

dispersal

•

ecological modeling

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landscape

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metacommunity

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optimal channel network

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river networks

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spanning trees

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dendritic connectivity

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metapopulation capacity

•

diversity patterns

•

genetic diversity

•

spatial-patterns

•

r package

•

dynamics

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elevation

Note

This article is licensed under a Creative Commons Attribution License.

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
ECHO  
Available on Infoscience
July 26, 2020
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/170385
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