Repository logo

Infoscience

  • English
  • French
Log In
Logo EPFL, École polytechnique fédérale de Lausanne

Infoscience

  • English
  • French
Log In
  1. Home
  2. Academic and Research Output
  3. Journal articles
  4. A Hierarchical Structure of Cortical Interneuron Electrical Diversity Revealed by Automated Statistical Analysis
 
research article

A Hierarchical Structure of Cortical Interneuron Electrical Diversity Revealed by Automated Statistical Analysis

Druckmann, Shaul
•
Hill, Sean  
•
Schuermann, Felix  
Show more
2013
Cerebral Cortex

Although the diversity of cortical interneuron electrical properties is well recognized, the number of distinct electrical types (e-types) is still a matter of debate. Recently, descriptions of interneuron variability were standardized by multiple laboratories on the basis of a subjective classification scheme as set out by the Petilla convention (Petilla Interneuron Nomenclature Group, PING). Here, we present a quantitative, statistical analysis of a database of nearly five hundred neurons manually annotated according to the PING nomenclature. For each cell, 38 features were extracted from responses to suprathreshold current stimuli and statistically analyzed to examine whether cortical interneurons subdivide into e-types. We showed that the partitioning into different e-types is indeed the major component of data variability. The analysis suggests refining the PING e-type classification to be hierarchical, whereby most variability is first captured within a coarse subpartition, and then subsequently divided into finer subpartitions. The coarse partition matches the well-known partitioning of interneurons into fast spiking and adapting cells. Finer subpartitions match the burst, continuous, and delayed subtypes. Additionally, our analysis enabled the ranking of features according to their ability to differentiate among e-types. We showed that our quantitative e-type assignment is more than 90 accurate and manages to catch several human errors.

  • Files
  • Details
  • Metrics
Type
research article
DOI
10.1093/cercor/bhs290
Web of Science ID

WOS:000327431400020

PubMed ID

22989582

Author(s)
Druckmann, Shaul
Hill, Sean  
Schuermann, Felix  
Markram, Henry  
Segev, Idan
Date Issued

2013

Publisher

Oxford University Press

Published in
Cerebral Cortex
Volume

23

Issue

12

Start page

2994

End page

3006

Subjects

cell type

•

clustering

•

dimensionality reduction

•

GABA

•

supervised classification

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LNMC  
BBP-GR-HILL  
GR-FSCH  
Show more
Available on Infoscience
January 9, 2014
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/99254
Logo EPFL, École polytechnique fédérale de Lausanne
  • Contact
  • infoscience@epfl.ch

  • Follow us on Facebook
  • Follow us on Instagram
  • Follow us on LinkedIn
  • Follow us on X
  • Follow us on Youtube
AccessibilityLegal noticePrivacy policyCookie settingsEnd User AgreementGet helpFeedback

Infoscience is a service managed and provided by the Library and IT Services of EPFL. © EPFL, tous droits réservés