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Transforms and Operators for Directional Bioimage Analysis: A Survey

Püspöki, Zsuzsanna  
•
Storath, Martin Kurt  
•
Sage, Daniel  
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De Vos, W.H.
•
Munck, S.
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2016
Advances in Anatomy, Embryology and Cell Biology

We give a methodology-oriented perspective on directional image analysis and rotation-invariant processing. We review the state of the art in the field and make connections with recent mathematical developments in functional analysis and wavelet theory. We unify our perspective within a common framework using operators. The intent is to provide image-processing methods that can be deployed in algorithms that analyze biomedical images with improved rotation invariance and high directional sensitivity. We start our survey with classical methods such as directional-gradient and the structure tensor. Then, we discuss how these methods can be improved with respect to robustness, invariance to geometric transformations (with a particular interest in scaling), and computation cost. To address robustness against noise, we move forward to higher degrees of directional selectivity and discuss Hessian-based detection schemes. To present multiscale approaches, we explain the differences between Fourier filters, directional wavelets, curvelets, and shearlets. To reduce the computational cost, we address the problem of matching directional patterns by proposing steerable filters, where one might perform arbitrary rotations and optimizations without discretizing the orientation. We define the property of steerability and give an introduction to the design of steerable filters. We cover the spectrum from simple steerable filters through pyramid schemes up to steerable wavelets. We also present illustrations on the design of steerable wavelets and their application to pattern recognition.

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Type
book part or chapter
DOI
10.1007/978-3-319-28549-8_3
Author(s)
Püspöki, Zsuzsanna  
Storath, Martin Kurt  
Sage, Daniel  
Unser, Michaël  
Editors
De Vos, W.H.
•
Munck, S.
•
Timmermans, J.-P.
Date Issued

2016

Publisher

Springer International Publishing

Published in
Advances in Anatomy, Embryology and Cell Biology
Total of pages

69-93

Series title/Series vol.

Focus on Bio-Image Informatics; 219

Written at

EPFL

EPFL units
LIB  
Available on Infoscience
July 10, 2019
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/159000
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