Repository logo

Infoscience

  • English
  • French
Log In
Logo EPFL, École polytechnique fédérale de Lausanne

Infoscience

  • English
  • French
Log In
  1. Home
  2. Academic and Research Output
  3. Journal articles
  4. Polysaccharide Breakdown Products Drive Degradation-dispersal Cycles of Foraging Bacteria Through Changes in Metabolism and Motility
 
research article

Polysaccharide Breakdown Products Drive Degradation-dispersal Cycles of Foraging Bacteria Through Changes in Metabolism and Motility

Stubbusch, Astrid Katharina Maria
•
Keegstra, Johannes M.
•
Schwartzman, Julia
Show more
October 21, 2024
Elife

Most of Earth's biomass is composed of polysaccharides. During biomass decomposition, polysaccharides are degraded by heterotrophic bacteria as a nutrient and energy source and are thereby partly remineralized into CO2. As polysaccharides are heterogeneously distributed in nature, following the colonization and degradation of a polysaccharide hotspot the cells need to reach new polysaccharide hotspots. Even though many studies indicate that these degradation-dispersal cycles contribute to the carbon flow in marine systems, we know little about how cells alternate between polysaccharide degradation and motility, and which environmental factors trigger this behavioral switch. Here, we studied the growth of the marine bacterium Vibrio cyclitrophicus ZF270 on the abundant marine polysaccharide alginate, both in its soluble polymeric form as well as on its breakdown products. We used microfluidics coupled to time-lapse microscopy to analyze motility and growth of individual cells, and RNA sequencing to study associated changes in gene expression. We found that single cells grow at reduced rate on alginate until they form large groups that cooperatively break down the polymer. Exposing cell groups to digested alginate accelerates cell growth and changes the expression of genes involved in alginate degradation and catabolism, central metabolism, ribosomal biosynthesis, and transport. However, exposure to digested alginate also triggers cells to become motile and disperse from cell groups, proportionally increasing with the group size before the nutrient switch, and this is accompanied by high expression of genes involved in flagellar assembly, chemotaxis, and quorum sensing. The motile cells chemotax toward polymeric but not digested alginate, likely enabling them to find new polysaccharide hotspots. Overall, our findings reveal cellular mechanisms that might also underlie bacterial degradation-dispersal cycles, which influence the remineralization of biomass in marine environments.

  • Files
  • Details
  • Metrics
Type
research article
DOI
10.7554/eLife.93855
Web of Science ID

WOS:001524742400001

PubMed ID

39429128

Author(s)
Stubbusch, Astrid Katharina Maria

Swiss Federal Institutes of Technology Domain

Keegstra, Johannes M.

Swiss Federal Institutes of Technology Domain

Schwartzman, Julia

Massachusetts Institute of Technology (MIT)

Pontrelli, Sammy

Swiss Federal Institutes of Technology Domain

Clerc, Estelle E.

Swiss Federal Institutes of Technology Domain

Charlton, Samuel

Swiss Federal Institutes of Technology Domain

Stocker, Roman

Swiss Federal Institutes of Technology Domain

Magnabosco, Cara

Swiss Federal Institutes of Technology Domain

Schubert, Olga T.

Swiss Federal Institutes of Technology Domain

Ackermann, Martin  

École Polytechnique Fédérale de Lausanne

Show more
Date Issued

2024-10-21

Publisher

eLIFE SCIENCES PUBL LTD

Published in
Elife
Volume

13

Article Number

RP93855

Subjects

vibrio cyclitrophicus ZF270

•

glycan

•

cell dispersal

•

alginate

•

exoenzyme

•

colony formation

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
IIE-GE  
FunderFunding(s)Grant NumberGrant URL

Marie Sklodovska-Curie Actions for People COFUND program fellowship

ETH fellowship

FEL-37-16-1

Marie Sklstrok;odowska-Curie Actions for People COFUND program fellowship

Show more
Available on Infoscience
July 25, 2025
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/252598
Logo EPFL, École polytechnique fédérale de Lausanne
  • Contact
  • infoscience@epfl.ch

  • Follow us on Facebook
  • Follow us on Instagram
  • Follow us on LinkedIn
  • Follow us on X
  • Follow us on Youtube
AccessibilityLegal noticePrivacy policyCookie settingsEnd User AgreementGet helpFeedback

Infoscience is a service managed and provided by the Library and IT Services of EPFL. © EPFL, tous droits réservés