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  4. Active Learning and Proofreading for Delineation of Curvilinear Structures
 
conference paper

Active Learning and Proofreading for Delineation of Curvilinear Structures

Mosinska, Agata Justyna  
•
Tarnawski, Jakub  
•
Fua, Pascal  
2017
Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017
MICCAI

Many state-of-the-art delineation methods rely on supervised machine learning algorithms. As a result, they require manually annotated training data, which is tedious to obtain. Furthermore, even minor classification errors may significantly affect the topology of the final result. In this paper we propose a generic approach to addressing both of these problems by taking into account the influence of a potential misclassification on the resulting delineation. In an Active Learning context, we identify parts of linear structures that should be annotated first in order to train a classifier effectively. In a proofreading context, we similarly find regions of the resulting reconstruction that should be verified in priority to obtain a nearly-perfect result. In both cases, by focusing the attention of the human expert on potential classification mistakes which are the most critical parts of the delineation, we reduce the amount of required supervision. We demonstrate the effectiveness of our approach on microscopy images depicting blood vessels and neurons.

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Type
conference paper
DOI
10.1007/978-3-319-66185-8_19
Author(s)
Mosinska, Agata Justyna  
Tarnawski, Jakub  
Fua, Pascal  
Date Issued

2017

Published in
Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017
Series title/Series vol.

Lecture Notes in Computer Science; 10434

Start page

165

End page

173

Subjects

Active Learning

•

Proofreading

•

Delineation

•

Light Microscopy

•

Mixed Integer Programming

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
CVLAB  
THL2  
Event nameEvent placeEvent date
MICCAI

Quebec City, Canada

September 10-14, 2017

Available on Infoscience
July 10, 2017
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/138872
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