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  4. Continuous in situ synthesis of a complete set of tRNAs sustains steady-state translation in a recombinant cell-free system
 
research article

Continuous in situ synthesis of a complete set of tRNAs sustains steady-state translation in a recombinant cell-free system

Li, Fengshi
•
Baranwal, Amogh Kumar  
•
Maerkl, Sebastian J.  
July 5, 2025
Nature Communications

Construction of a self-regenerating biochemical system is critical for building a synthetic cell. An essential step in building a self-regenerative system is producing a complete set of tRNAs for translation, which remains a significant challenge. Here, we reconstitute a complete set of 21 in vitro transcribed tRNAs and optimize their abundance to improve protein yield. Next, we show that protein expression in the PURE transcription-translation system can be achieved by in situ transcribing tRNAs from 21 linear tRNA templates or a single plasmid template. To enable synthesis of mature tRNAs from a circular template, we employ either a nicked plasmid template or T. maritima tRNase Z to post-transcriptionally process the precursor tRNAs. We ultimately achieve continuous in situ synthesis of a complete set of tRNAs capable of supporting sustained, steady-state protein expression in PURE reactions running on microfluidic chemostats. Our findings advance the development of an autopoietic biochemical system.

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Type
research article
DOI
10.1038/s41467-025-61671-8
Author(s)
Li, Fengshi

École Polytechnique Fédérale de Lausanne

Baranwal, Amogh Kumar  

École Polytechnique Fédérale de Lausanne

Maerkl, Sebastian J.  

École Polytechnique Fédérale de Lausanne

Date Issued

2025-07-05

Publisher

Springer Science and Business Media LLC

Published in
Nature Communications
Volume

16

Issue

1

Article Number

6212

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LBNC  
FunderFunding(s)Grant NumberGrant URL

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

220737,214843

Available on Infoscience
July 14, 2025
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/252147
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