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  4. Nonstatistical UV Fragmentation of Gas-Phase Peptides Reveals Conformers and Their Structural Features
 
research article

Nonstatistical UV Fragmentation of Gas-Phase Peptides Reveals Conformers and Their Structural Features

Kopysov, Vladimir  
•
Makarov, Alexander
•
Boyarkin, Oleg V.  
2016
The Journal of Physical Chemistry Letters

Solving the 3D structure of a biomolecule requires recognition of its conformers and measurements of their individual structural identities, which can be compared with calculations. We employ the phenomenon of nonstatistical photofragmentation, detected by a combination of UV cold ion spectroscopy and high-resolution mass spectrometry, to identify the main conformers of gas-phase peptides and to recover individual UV absorption and mass spectra of all of these conformers in a single laser scan. We first validate this approach with a benchmark dipeptide, Tyr-Ala, and then apply it to a decapeptide, gramicidin S. The revealed characteristic structural difference between the conformers of the latter identifies some of the previously calculated structures of gramicidin S as the most likely geometries of its remaining unsolved conformer.

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Type
research article
DOI
10.1021/acs.jpclett.6b00292
Web of Science ID

WOS:000372561900020

Author(s)
Kopysov, Vladimir  
Makarov, Alexander
Boyarkin, Oleg V.  
Date Issued

2016

Publisher

Amer Chemical Soc

Published in
The Journal of Physical Chemistry Letters
Volume

7

Start page

1067

End page

1071

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LCPM  
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/127158
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