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research article

Protein target highlights in CASP15: Analysis of models by structure providers

Alexander, Leila T.
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Durairaj, Janani
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Kryshtafovych, Andriy
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July 26, 2023
Proteins-Structure Function And Bioinformatics

We present an in-depth analysis of selected CASP15 targets, focusing on their biological and functional significance. The authors of the structures identify and discuss key protein features and evaluate how effectively these aspects were captured in the submitted predictions. While the overall ability to predict three-dimensional protein structures continues to impress, reproducing uncommon features not previously observed in experimental structures is still a challenge. Furthermore, instances with conformational flexibility and large multimeric complexes highlight the need for novel scoring strategies to better emphasize biologically relevant structural regions. Looking ahead, closer integration of computational and experimental techniques will play a key role in determining the next challenges to be unraveled in the field of structural molecular biology.

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Type
research article
DOI
10.1002/prot.26545
Web of Science ID

WOS:001035776300001

Author(s)
Alexander, Leila T.
Durairaj, Janani
Kryshtafovych, Andriy
Abriata, Luciano A.  
Bayo, Yusupha
Bhabha, Gira
Breyton, Cecile
Caulton, Simon G.
Chen, James
Degroux, Seraphine
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Date Issued

2023-07-26

Publisher

WILEY

Published in
Proteins-Structure Function And Bioinformatics
Subjects

Biochemistry & Molecular Biology

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Biophysics

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Biochemistry & Molecular Biology

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Biophysics

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casp

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cryo-em

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protein structure prediction

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x-ray crystallography

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receptor-binding protein

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humoral stress-response

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transfer-rna

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spatial-organization

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crystal-structure

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nuclear-envelope

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abc transporter

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aedes-aegypti

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linc complex

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mosquito

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPLEM  
Available on Infoscience
August 14, 2023
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/199869
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