Repository logo

Infoscience

  • English
  • French
Log In
Logo EPFL, École polytechnique fédérale de Lausanne

Infoscience

  • English
  • French
Log In
  1. Home
  2. Academic and Research Output
  3. Journal articles
  4. Genetic features and genomic targets of human KRAB-zinc finger proteins
 
research article

Genetic features and genomic targets of human KRAB-zinc finger proteins

de Tribolet-Hardy, Jonas  
•
Thorball, Christian W.  
•
Forey, Romain  
Show more
2023
Genome Research

Krüppel-associated box (KRAB) domain-containing zinc finger proteins (KZFPs) are one of the largest groups of transcription factors encoded by tetrapods, with 378 members in human alone. KZFP genes are often grouped in clusters reflecting amplification by gene and segment duplication since the gene family first emerged more than 400 million years ago. Previous work has revealed that many KZFPs recognize transposable element (TE)-embedded sequences as genomic targets, and that KZFPs facilitate the co-option of the regulatory potential of TEs for the benefit of the host. Here, we present a comprehensive survey of the genetic features and genomic targets of human KZFPs, notably completing past analyses by adding data on close to a hundred family members. General principles emerge from our study of the TE-KZFP regulatory system, which point to multipronged evolutionary mechanisms underlaid by highly complex and combinatorial modes of action with strong influences on human speciation.

  • Files
  • Details
  • Metrics
Type
research article
DOI
10.1101/gr.277722.123
Author(s)
de Tribolet-Hardy, Jonas  
Thorball, Christian W.  
Forey, Romain  
Planet, Evarist  
Duc, Julien  
Coudray, Alexandre  
Khubieh, Bara
Offner, Sandra  
Pulver, Cyril  
Fellay, Jacques  
Show more
Date Issued

2023

Published in
Genome Research
Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LVG  
UPFELLAY  
Available on Infoscience
September 28, 2023
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/201121
Logo EPFL, École polytechnique fédérale de Lausanne
  • Contact
  • infoscience@epfl.ch

  • Follow us on Facebook
  • Follow us on Instagram
  • Follow us on LinkedIn
  • Follow us on X
  • Follow us on Youtube
AccessibilityLegal noticePrivacy policyCookie settingsEnd User AgreementGet helpFeedback

Infoscience is a service managed and provided by the Library and IT Services of EPFL. © EPFL, tous droits réservés