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research article

Structure of outer membrane protein G in lipid bilayers

Retel, Joren S.
•
Nieuwkoop, Andrew J.
•
Hiller, Matthias
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2017
Nature Communications

beta-barrel proteins mediate nutrient uptake in bacteria and serve vital functions in cell signaling and adhesion. For the 14-strand outer membrane protein G of Escherichia coli, opening and closing is pH-dependent. Different roles of the extracellular loops in this process were proposed, and X-ray and solution NMR studies were divergent. Here, we report the structure of outer membrane protein G investigated in bilayers of E. coli lipid extracts by magic-angle-spinning NMR. In total, 1847 inter-residue H-1-H-1 and C-13-C-13 distance restraints, 256 torsion angles, but no hydrogen bond restraints are used to calculate the structure. The length of beta-strands is found to vary beyond the membrane boundary, with strands 6-8 being the longest and the extracellular loops 3 and 4 well ordered. The site of barrel closure at strands 1 and 14 is more disordered than most remaining strands, with the flexibility decreasing toward loops 3 and 4. Loop 4 presents a well-defined helix.

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Type
research article
DOI
10.1038/s41467-017-02228-2
Web of Science ID

WOS:000417702300024

Author(s)
Retel, Joren S.
Nieuwkoop, Andrew J.
Hiller, Matthias
Higman, Victoria A.
Barbet-Massin, Emeline
Stanek, Jan
Andreas, Loren B.
Franks, W. Trent
Van Rossum, Barth-Jan
Vinothkumar, Kutti R.
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Date Issued

2017

Publisher

Nature Publishing Group

Published in
Nature Communications
Volume

8

Article Number

2073

Editorial or Peer reviewed

REVIEWED

Written at

OTHER

EPFL units
LRM  
Available on Infoscience
January 15, 2018
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/144042
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