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research article

Parameter extraction and classification of three cortical neuron types reveals two distinct adaptation mechanisms

Mensi, Skander  
•
Naud, Richard  
•
Pozzorini, Christian
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2012
Journal Of Neurophysiology

Mensi S, Naud R, Pozzorini C, Avermann M, Petersen CCH, Gerstner W. Parameter extraction and classification of three cortical neuron types reveals two distinct adaptation mechanisms. J Neurophysiol 107: 1756-1775, 2012. First published December 7, 2011; doi:10.1152/jn.00408.2011.-Cortical information processing originates from the exchange of action potentials between many cell types. To capture the essence of these interactions, it is of critical importance to build mathematical models that reflect the characteristic features of spike generation in individual neurons. We propose a framework to automatically extract such features from current-clamp experiments, in particular the passive properties of a neuron (i.e., membrane time constant, reversal potential, and capacitance), the spike-triggered adaptation currents, as well as the dynamics of the action potential threshold. The stochastic model that results from our maximum likelihood approach accurately predicts the spike times, the subthreshold voltage, the firing patterns, and the type of frequency-current curve. Extracting the model parameters for three cortical cell types revealed that cell types show highly significant differences in the time course of the spike-triggered currents and moving threshold, that is, in their adaptation and refractory properties but not in their passive properties. In particular, GABAergic fast-spiking neurons mediate weak adaptation through spike-triggered currents only, whereas regular spiking excitatory neurons mediate adaptation with both moving threshold and spike-triggered currents. GABAergic nonfast-spiking neurons combine the two distinct adaptation mechanisms with reduced strength. Differences between cell types are large enough to enable automatic classification of neurons into three different classes. Parameter extraction is performed for individual neurons so that we find not only the mean parameter values for each neuron type but also the spread of parameters within a group of neurons, which will be useful for future large-scale computer simulations.

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Type
research article
DOI
10.1152/jn.00408.2011
Web of Science ID

WOS:000302140300021

Author(s)
Mensi, Skander  
Naud, Richard  
Pozzorini, Christian
Avermann, Michael  
Petersen, Carl C. H.  
Gerstner, Wulfram  
Date Issued

2012

Publisher

American Physiological Society

Published in
Journal Of Neurophysiology
Volume

107

Issue

6

Start page

1756

End page

1775

Subjects

dynamic threshold

•

fitting method

•

model characterization

•

spike-frequency adaptation

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Maximum-Likelihood-Estimation

•

Sensorimotor Cortex Invitro

•

Ca1 Pyramidal Neurons

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Squid Giant Axon

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In-Vivo

•

Barrel Cortex

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Spike Trains

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Fire Neurons

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Coincidence Detection

•

Neocortical Neurons

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LCN  
LSENS  
Available on Infoscience
April 26, 2012
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/79703
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