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  4. Environment-dependent epistasis increases phenotypic diversity in gene regulatory networks
 
research article

Environment-dependent epistasis increases phenotypic diversity in gene regulatory networks

Baier, Florian  
•
Gauye, Florence
•
Perez-Carrasco, Ruben
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May 26, 2023
Science Advances

Mutations to gene regulatory networks can be maladaptive or a source of evolutionary novelty. Epistasis con-founds our understanding of how mutations affect the expression patterns of gene regulatory networks, a chal-lenge exacerbated by the dependence of epistasis on the environment. We used the toolkit of synthetic biology to systematically assay the effects of pairwise and triplet combinations of mutant genotypes on the expression pattern of a gene regulatory network expressed in Escherichia coli that interprets an inducer gradient across a spatial domain. We uncovered a preponderance of epistasis that can switch in magnitude and sign across the inducer gradient to produce a greater diversity of expression pattern phenotypes than would be possible in the absence of such environment-dependent epistasis. We discuss our findings in the context of the evolution of hybrid incompatibilities and evolutionary novelties.

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Type
research article
DOI
10.1126/sciadv.adf1773
Web of Science ID

WOS:001009728200009

Author(s)
Baier, Florian  
Gauye, Florence
Perez-Carrasco, Ruben
Payne, Joshua L.
Schaerli, Yolanda
Date Issued

2023-05-26

Publisher

AMER ASSOC ADVANCEMENT SCIENCE

Published in
Science Advances
Volume

9

Issue

21

Article Number

eadf1773

Subjects

Multidisciplinary Sciences

•

Science & Technology - Other Topics

•

higher-order epistasis

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hybrid incompatibility

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fitness landscape

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transcription circuits

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directional selection

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bioenergetic model

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evolution

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speciation

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pathways

•

system

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
RIVER  
Available on Infoscience
July 31, 2023
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/199531
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