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  4. On the origin of the MR image phase contrast: An in vivo MR microscopy study of the rat brain at 14.1 T
 
research article

On the origin of the MR image phase contrast: An in vivo MR microscopy study of the rat brain at 14.1 T

Marques, Jose P.  
•
Maddage, Rajika  
•
Mlynarik, Vladimir  
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2009
Neuroimage

Recent studies at high magnetic fields using the phase of gradient-echo MR images have shown the ability to unveil cortical substructure in the human brain. To investigate the contrast mechanisms in phase imaging, this study extends, for the first time, phase imaging to the rodent brain. Using a 14.1 T horizontal bore animal MRI scanner for in vivo micro-imaging, images with an in-plane resolution of 33 mu m were acquired. Phase images revealed, often more clearly than the corresponding magnitude images, hippocampal fields, cortical layers (e. g. layer 4), cerebellar layers (molecular and granule cell layers) and small white matter structures present in the striatum and septal nucleus. The contrast of the phase images depended in part on the orientation of anatomical structures relative to the magnetic field, consistent with bulk susceptibility variations between tissues. This was found not only for vessels, but also for white matter structures, such as the anterior commissure, and cortical layers in the cerebellum.

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Type
research article
DOI
10.1016/j.neuroimage.2009.02.023
Web of Science ID

WOS:000265724300001

Author(s)
Marques, Jose P.  
Maddage, Rajika  
Mlynarik, Vladimir  
Gruetter, Rolf  
Date Issued

2009

Publisher

Elsevier

Published in
Neuroimage
Volume

46

Start page

345

End page

352

Subjects

Phase imaging

•

In vivo rat brain

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High field MRI

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Contrast mechanisms

•

Magnetic-Resonance Microscopy

•

White-Matter Contrast

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Mouse-Brain

•

Amyloid Plaques

•

Transgenic Mice

•

Susceptibility

•

Gray

•

CIBM-AIT

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
CIBM  
LIFMET  
Available on Infoscience
November 30, 2010
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/60272
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