Repository logo

Infoscience

  • English
  • French
Log In
Logo EPFL, École polytechnique fédérale de Lausanne

Infoscience

  • English
  • French
Log In
  1. Home
  2. Academic and Research Output
  3. Journal articles
  4. Climbing into their Skin to Understand Contextual Protein-Protein Associations and Localizations: Functional Investigations in Transgenic Live Model Organisms
 
review article

Climbing into their Skin to Understand Contextual Protein-Protein Associations and Localizations: Functional Investigations in Transgenic Live Model Organisms

Long, Marcus J. C.
•
Aye, Yimon  
March 21, 2024
Chembiochem

Borrowing some quotes from Harper Lee's novel "To Kill A Mockingbird" to help frame our manuscript, we discuss methods to profile local proteomes. We initially focus on chemical biology regimens that function in live organisms and use reactive biotin species for this purpose. We then consider ways to add new dimensions to these experimental regimens, principally by releasing less reactive (i. e., more selective) (preter)natural electrophiles. Although electrophile release methods may have lower resolution and label fewer proteins than biotinylation methods, their ability to probe simultaneously protein function and locale raises new and interesting possibilities for the field.|What Stirs Beneath. Understanding protein-specific interactomes, or localization, is crucial for decoding protein function. New biotinylation methods can do just that even in live organisms. However, these methods have some limitations as they are intrinsically unable to directly probe function. Here new methods that can investigate locale-specific reactivity, are discussed, opening routes to locale-specific perturbation of function. image

  • Details
  • Metrics
Type
review article
DOI
10.1002/cbic.202400005
Web of Science ID

WOS:001188282500001

Author(s)
Long, Marcus J. C.
Aye, Yimon  
Date Issued

2024-03-21

Publisher

Wiley-V C H Verlag Gmbh

Published in
Chembiochem
Subjects

Life Sciences & Biomedicine

•

Proximity/Interactome Mapping Tools

•

Function-Guided Spatial-Proteomics

•

Electrophile Signaling

•

Rex-Technologies

•

Bio-Id And Variants

•

Apex

•

Protein-Protein Interactions

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LEAGO  
FunderGrant Number

EPFL

UNIL

Swiss Federal Institute of Technology Lausanne (EPFL)

Available on Infoscience
April 17, 2024
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/207248
Logo EPFL, École polytechnique fédérale de Lausanne
  • Contact
  • infoscience@epfl.ch

  • Follow us on Facebook
  • Follow us on Instagram
  • Follow us on LinkedIn
  • Follow us on X
  • Follow us on Youtube
AccessibilityLegal noticePrivacy policyCookie settingsEnd User AgreementGet helpFeedback

Infoscience is a service managed and provided by the Library and IT Services of EPFL. © EPFL, tous droits réservés