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  4. Interspecies interactions determine growth dynamics of biopolymer- degrading populations in microbial communities
 
research article

Interspecies interactions determine growth dynamics of biopolymer- degrading populations in microbial communities

D'Souza, Glen
•
Schwartzman, Julia
•
Keegstra, Johannes
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October 31, 2023
Proceedings Of The National Academy Of Sciences Of The United States Of America (PNAS)

Microbial communities perform essential ecosystem functions such as the remineralization of organic carbon that exists as biopolymers. The first step in mineralization is performed by biopolymer degraders, which harbor enzymes that can break down polymers into constituent oligo- or monomeric forms. The released nutrients not only allow degraders to grow, but also promote growth of cells that either consume the degradation products, i.e., exploiters, or consume metabolites released by the degraders or exploiters, i.e., scavengers. It is currently not clear how such remineralizing communities assemble at the microscale-how interactions between the different guilds influence their growth and spatial distribution, and hence the development and dynamics of the community. Here, we address this knowledge gap by studying marine microbial communities that grow on the abundant marine biopolymer alginate. We used batch growth assays and microfluidics coupled to time -lapse microscopy to quantitatively investigate growth and spatial distribution of single cells. We found that the presence of exploiters or scavengers alters the spatial distribution of degrader cells. In general, exploiters and scavengers-which we collectively refer to as cross- feeder cells-slowed down the growth of degrader cells. In addition, coexistence with cross- feeders altered the production of the extracellular enzymes that break down polymers by degrader cells. Our findings reveal that ecological interactions by nondegrading community members have a profound impact on the functions of microbial communities that remineralize carbon biopolymers in nature.

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Type
research article
DOI
10.1073/pnas.2305198120
Web of Science ID

WOS:001127129700001

Author(s)
D'Souza, Glen
Schwartzman, Julia
Keegstra, Johannes
Schreier, Jeremy E.
Daniels, Michael
Cordero, Otto X.
Stocker, Roman
Ackermann, Martin  
Date Issued

2023-10-31

Publisher

National Academy of Sciences

Published in
Proceedings Of The National Academy Of Sciences Of The United States Of America (PNAS)
Volume

120

Issue

44

Article Number

e2305198120

Subjects

Cross-Feeding

•

Community Assembly

•

Spatial Organization

•

Biopolymer Degradation

•

Dispersal

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
IIE  
FunderGrant Number

ETH fellowship

Marie Curie Actions for People COFUND program fellowship

FEL- 37- 16- 1

Simons Foundation Collaboration on Principles of Microbial Ecosystems

542379

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Available on Infoscience
March 18, 2024
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/206298
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