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research article

Antimicrobial susceptibility testing by measuring bacterial oxygen consumption on an integrated platform

Liu, Yang
•
Lehnert, Thomas  
•
Mayr, Torsten
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July 16, 2021
Lab On A Chip

Cellular respiration is a fundamental feature of metabolic activity and oxygen consumption can be considered as a reliable indicator of bacterial aerobic respiration, including for facultative anaerobic bacteria like E. coli. Addressing the emerging global health challenge of antimicrobial resistance, we performed antimicrobial susceptibility testing using the bacterial oxygen consumption rate (OCR) as a phenotypic indicator. We demonstrated that microbial exposure to antibiotics showed systematic OCR variations, which enabled determining minimum inhibitory concentrations for three clinically relevant antibiotics, ampicillin, ciprofloxacin, and gentamicin, within a few hours. Our study was performed by using photoluminescence-based oxygen sensing in a microchamber format, which enabled reducing the sample volume to a few hundred microliters. OCR modeling based on exponential bacterial growth allowed estimating the bacterial doubling time for various culture conditions (different types of media, different culture temperature and antibiotic concentrations). Furthermore, correlating metabolic heat production data, as obtained by nanocalorimetry in the same type of microchamber, and OCR measurements provided further insight on the actual metabolic state and activity of a microbial sample. This approach represents a new path towards more comprehensive microbiological studies performed on integrated miniaturized systems.

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Type
research article
DOI
10.1039/d1lc00296a
Web of Science ID

WOS:000674883700001

Author(s)
Liu, Yang
Lehnert, Thomas  
Mayr, Torsten
Gijs, Martin A. M.  
Date Issued

2021-07-16

Publisher

ROYAL SOC CHEMISTRY

Published in
Lab On A Chip
Volume

21

Issue

18

Start page

3520

End page

3531

Subjects

Biochemical Research Methods

•

Chemistry, Multidisciplinary

•

Chemistry, Analytical

•

Nanoscience & Nanotechnology

•

Instruments & Instrumentation

•

Biochemistry & Molecular Biology

•

Chemistry

•

Science & Technology - Other Topics

•

antibiotic susceptibility

•

microfluidic devices

•

metabolism

•

sensor

•

resistance

•

growth

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LMIS2  
Available on Infoscience
July 31, 2021
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/180284
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