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  4. Molecular Bases of the Membrane Association Mechanism Potentiating Antibiotic Resistance by New Delhi Metallo-beta-lactamase 1
 
research article

Molecular Bases of the Membrane Association Mechanism Potentiating Antibiotic Resistance by New Delhi Metallo-beta-lactamase 1

Prunotto, Alessio  
•
Bahr, Guillermo
•
Gonzalez, Lisandro J.
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October 9, 2020
Acs Infectious Diseases

Resistance to last-resort carbapenem antibiotics is an increasing threat to human health, as it critically limits therapeutic options. Metallo-beta-lactamases (MBLs) are the largest family of carbapenemases, enzymes that inactivate these drugs. Among MBLs, New Delhi metallo-beta-lactamase 1 (NDM-1) has experienced the fastest and largest worldwide dissemination. This success has been attributed to the fact that NDM-1 is a lipidated protein anchored to the outer membrane of bacteria, while all other MBLs are soluble periplasmic enzymes. By means of a combined experimental and computational approach, we show that NDM-1 interacts with the surface of bacterial membranes in a stable, defined conformation, in which the active site is not occluded by the bilayer. Although the lipidation is required for a long-lasting interaction, the globular domain of NDM-1 is tuned to interact specifically with the outer bacterial membrane. In contrast, this affinity is not observed for VIM-2, a natively soluble MBL. Finally, we identify key residues involved in the membrane interaction with NDM-1, which constitute potential targets for developing therapeutic strategies able to combat resistance granted by this enzyme.

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Type
research article
DOI
10.1021/acsinfecdis.0c00341
Web of Science ID

WOS:000580584600017

Author(s)
Prunotto, Alessio  
Bahr, Guillermo
Gonzalez, Lisandro J.
Vila, Alejandro J.
Dal Peraro, Matteo  
Date Issued

2020-10-09

Publisher

AMER CHEMICAL SOC

Published in
Acs Infectious Diseases
Volume

6

Issue

10

Start page

2719

End page

2731

Subjects

Chemistry, Medicinal

•

Infectious Diseases

•

Pharmacology & Pharmacy

•

new delhi metallo-beta-lactamase

•

antibiotic resistance

•

protein-membrane interaction

•

molecular dynamics

•

outer-membrane

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force-field

•

protein

•

dynamics

•

bacteria

•

lipids

•

ndm-1

•

simulations

•

binding

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPDALPE  
Available on Infoscience
November 7, 2020
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/173095
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