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research article

Molecular basis of histone H3K4me3 recognition by ING4

Palacios, Alicia
•
Muñoz, Inés G
•
Pantoja-Uceda, David
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2008
Journal of Biological Chemistry

The inhibitors of growth (ING) family of tumor suppressors consists of five homologous proteins involved in chromatin remodeling. They form part of different acetylation and deacetylation complexes and are thought to direct them to specific regions of the chromatin, through the recognition of H3K4me3 (trimethylated K4 in the histone 3 tail) by their conserved plant homeodomain (PHD). We have determined the crystal structure of ING4-PHD bound to H3K4me3, which reveals a tight complex stabilized by numerous interactions. NMR shows that there is a reduction in the backbone mobility on the regions of the PHD that participate in the peptide binding, and binding affinities differ depending on histone tail lengths Thermodynamic analysis reveals that the discrimination in favor of methylated lysine is entropy-driven, contrary to what has been described for chromodomains. The molecular basis of H3K4me3 recognition by ING4 differs from that of ING2, which is consistent with their different affinities for methylated histone tails. These differences suggest a distinct role in transcriptional regulation for these two ING family members because of the antagonistic effect of the complexes that they recruit onto chromatin. Our results illustrate the versatility of PHD fingers as readers of the histone code.

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Type
research article
DOI
10.1074/jbc.M710020200
Author(s)
Palacios, Alicia
Muñoz, Inés G
Pantoja-Uceda, David
Marcaida, María J
Torres, Daniel
Martín-García, José M
Luque, Irene
Montoya, Guillermo
Blanco, Francisco J
Date Issued

2008

Publisher

American Society for Biochemistry and Molecular Biology

Published in
Journal of Biological Chemistry
Volume

283

Issue

23

Start page

15956

End page

64

Editorial or Peer reviewed

NON-REVIEWED

Written at

EPFL

EPFL units
IBI-SV  
Available on Infoscience
November 20, 2016
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/131216
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