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research article

Protein residue linking in a single spectrum for magic-angle spinning NMR assignment

Andreas, Loren B.
•
Stanek, Jan
•
Le Marchand, Tanguy
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2015
Journal Of Biomolecular Nmr

Here we introduce a new pulse sequence for resonance assignment that halves the number of data sets required for sequential linking by directly correlating sequential amide resonances in a single diagonal-free spectrum. The method is demonstrated with both microcrystalline and sedimented deuterated proteins spinning at 60 and 111 kHz, and a fully protonated microcrystalline protein spinning at 111 kHz, with as little as 0.5 mg protein sample. We find that amide signals have a low chance of ambiguous linkage, which is further improved by linking in both forward and backward directions. The spectra obtained are amenable to automated resonance assignment using general-purpose software such as UNIO-MATCH.

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Type
research article
DOI
10.1007/s10858-015-9956-1
Web of Science ID

WOS:000357489200003

Author(s)
Andreas, Loren B.
•
Stanek, Jan
•
Le Marchand, Tanguy
•
Bertarello, Andrea
•
Paepe, Diane Cala-De
•
Lalli, Daniela
•
Krejcikova, Magdalena
•
Doyen, Camille
•
Oester, Carl
•
Knott, Benno
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Date Issued

2015

Publisher

Springer Verlag

Published in
Journal Of Biomolecular Nmr
Volume

62

Issue

3

Start page

253

End page

261

Subjects

Magic-angle spinning

•

Protein resonance assignment

•

Proton detection

•

Automation

Peer reviewed

REVIEWED

Written at

OTHER

EPFL units
LRM  
Available on Infoscience
September 28, 2015
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/119002
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