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research article

Structure-Based Engineering of a Minimal Porin Reveals Loop-Independent Channel Closure

Grosse, Wolfgang
•
Psakis, Georgios
•
Mertins, Barbara
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2014
Biochemistry

Porins, like outer membrane protein G (OmpG) of Escherichia coli, are ideal templates among ion channels for protein and chemical engineering because of their robustness and simple architecture. OmpG shows fast transitions between open and closed states, which were attributed to loop 6 (L6). As flickering limits single-channel-based applications, we pruned L6 by either 8 or 12 amino acids. While the open probabilities of both L6 variants resemble that of native OmpG, their gating frequencies were reduced by 63 and 81%, respectively. Using the 3.2 angstrom structure of the shorter L6 variant in the open state, we engineered a minimal porin (220 amino acids), where all remaining extramembranous loops were truncated. Unexpectedly, this minimized porin still exhibited gating, but it was 5-fold less frequent than in OmpG. The residual gating of the minimal pore is hence independent of L6 rearrangements and involves narrowing of the ion conductance pathway most probably driven by global stretching flexing deformations of the membrane-embedded beta-barrel.

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Type
research article
DOI
10.1021/bi500660q
Web of Science ID

WOS:000339686600009

Author(s)
Grosse, Wolfgang
Psakis, Georgios
Mertins, Barbara
Reiss, Philipp
Windisch, Dirk
Brademann, Felix
Buerck, Jochen
Ulrich, Anne
Koert, Ulrich
Essen, Lars-Oliver
Date Issued

2014

Publisher

Amer Chemical Soc

Published in
Biochemistry
Volume

53

Issue

29

Start page

4826

End page

4838

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
ISIC  
Available on Infoscience
August 29, 2014
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/106288
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