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research article

Bicyclic peptide ligands pulled out of cysteine-rich peptide libraries

Chen, Shiyu  
•
Inmaculada, Rentero Rebollo  
•
Buth, Sergii A.
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2013
Journal of the American Chemical Society

Bicyclic peptide ligands were found to have good binding affinity and target specificity. However, the method applied to generate bicyclic ligands based on phage-peptide alkylation is technically complex and limits its application to specialized laboratories. Herein, we report a method that involves a simpler and more robust procedure that additionally allows screening of structurally more diverse bicyclic peptide libraries. In brief, phage-encoded combinatorial peptide libraries of the format XmCXnCXoCXp are oxidized to connect two pairs of cysteines (C). This allows the generation of 3×(m+n+o+p) different peptide topologies because the fourth cysteine can appear in any of the (m+n+o+p) randomized amino acid positions (X). Panning of such libraries enriched strongly peptides with four cysteines and yielded tight binders to protein targets. X-ray structure analysis revealed an important structural role of the disulfide bridges. In summary, the presented approach offers facile access to bicyclic peptide ligands with good binding affinities.

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Type
research article
DOI
10.1021/ja400461h
Web of Science ID

WOS:000318469100032

Author(s)
Chen, Shiyu  
•
Inmaculada, Rentero Rebollo  
•
Buth, Sergii A.
•
Morales-Sanfrutos, Julia  
•
Touati, Jeremy  
•
Leiman, Petr G.
•
Heinis, Christian  
Date Issued

2013

Published in
Journal of the American Chemical Society
Volume

135

Issue

17

Start page

6562

End page

6569

Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LPPT  
Available on Infoscience
April 15, 2013
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/91474
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