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  4. On-line monitoring of nine different batch cultures of E-coli by mid-infrared spectroscopy, using a single spectra library for calibration
 
research article

On-line monitoring of nine different batch cultures of E-coli by mid-infrared spectroscopy, using a single spectra library for calibration

Schenk, Jonas  
•
Viscasillas, Carla
•
Marison, Ian W.  
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2008
Journal Of Biotechnology

A single spectra library was used to monitor on-line, by mid-infrared spectroscopy, nine different batch cultures of Escherichia coli performed with various medium compositions, including chemically complex formulations. Whereas the classic chemometrics approach would have required the preparation and measurement of hundreds of standards, only six spectra were included in the library. These included the molar absorbance of the four main metabolites (i.e. glucose, glycerol, ammonium and acetate), and the remaining two were drift spectra found by factor analysis. The accuracy of the prediction was not altered by a change of the carbon source, the ammonium concentration or even the addition of chemically undefined compounds, such as yeast extract and peptone. The standard errors of prediction. averaged over the nine experiments were 8.0, 12.3, 5.9 and 5.6 mM for glucose, glycerol, ammonium and acetate, respectively. Inclusion of two drift spectra in the library provided an estimation of how noisy an experiment was. This also allowed detection of batch cultures that require further investigation, namely runs which were subject to large signal drift or during which an unexpected compound was produced, without having to carry out time-consuming off-line analyses. (C) 2008 Elsevier B.V. All rights reserved.

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Type
research article
DOI
10.1016/j.jbiotec.2007.12.014
Web of Science ID

WOS:000254681000011

Author(s)
Schenk, Jonas  
Viscasillas, Carla
Marison, Ian W.  
von Stockar, Urs  
Date Issued

2008

Published in
Journal Of Biotechnology
Volume

134

Start page

93

End page

102

Subjects

on-line monitoring

•

mid-infrared spectroscopy

•

spectra library

•

Escherichia coli

•

multivariate analysis

•

Mid-Ir Spectroscopy

•

Real-Time

•

Fermentation Process

•

Bioprocesses

•

Mirs

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LGCB  
Available on Infoscience
November 24, 2010
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/58368
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