000114877 001__ 114877
000114877 005__ 20190316234108.0
000114877 0247_ $$2doi$$a10.1093/nar/28.1.302
000114877 037__ $$aARTICLE
000114877 245__ $$aThe eukaryotic promoter database (EPD)
000114877 269__ $$a2000
000114877 260__ $$c2000
000114877 336__ $$aJournal Articles
000114877 500__ $$aSwiss Institute of Bioinformatics and Swiss Institute for Experimental Cancer Research, Ch. des Boveresses 155, 1066-Epalinges s/Lausanne, Switzerland.
000114877 520__ $$aThe Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters for which the transcription start site has been determined experimentally. Access to promoter sequences is provided by pointers to positions in nucleotide sequence entries. The annotation part of an entry includes a description of the initiation site mapping data, exhaustive cross-references to the EMBL nucleotide sequence database, SWISS-PROT, TRANSFAC and other databases, as well as bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis. WWW-based interfaces have been developed that enable the user to view EPD entries in different formats, to select and extract promoter sequences according to a variety of criteria, and to navigate to related databases exploiting different cross-references. The EPD web site also features yearly updated base frequency matrices for major eukaryotic promoter elements. EPD can be accessed at http://www.epd.isb-sib.ch
000114877 700__ $$aPerier, R. C.
000114877 700__ $$aPraz, V.
000114877 700__ $$aJunier, T.
000114877 700__ $$aBonnard, C.
000114877 700__ $$g113607$$aBucher, P.$$0244404
000114877 773__ $$j28$$tNucleic Acids Res$$k1$$q302-3
000114877 8564_ $$uhttps://infoscience.epfl.ch/record/114877/files/Nucl.%20Acids%20Res.-2000-P%C3%A9rier-302-3.pdf$$zPublisher's version$$s74340$$yPublisher's version
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000114877 937__ $$aGR-BUCHER-ARTICLE-2000-004
000114877 973__ $$rREVIEWED$$sPUBLISHED$$aOTHER
000114877 980__ $$aARTICLE