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  4. Release of linker histone from the nucleosome driven by polyelectrolyte competition with a disordered protein
 
research article

Release of linker histone from the nucleosome driven by polyelectrolyte competition with a disordered protein

Heidarsson, Petur O.
•
Mercadante, Davide
•
Sottini, Andrea
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January 6, 2022
Nature Chemistry

Highly charged intrinsically disordered proteins are essential regulators of chromatin structure and transcriptional activity. Here we identify a surprising mechanism of molecular competition that relies on the pronounced dynamical disorder present in these polyelectrolytes and their complexes. The highly positively charged human linker histone H1.0 (H1) binds to nucleosomes with ultrahigh affinity, implying residence times incompatible with efficient biological regulation. However, we show that the disordered regions of H1 retain their large-amplitude dynamics when bound to the nucleosome, which enables the highly negatively charged and disordered histone chaperone prothymosin alpha to efficiently invade the H1-nucleosome complex and displace H1 via a competitive substitution mechanism, vastly accelerating H1 dissociation. By integrating experiments and simulations, we establish a molecular model that rationalizes the remarkable kinetics of this process structurally and dynamically. Given the abundance of polyelectrolyte sequences in the nuclear proteome, this mechanism is likely to be widespread in cellular regulation.

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Type
research article
DOI
10.1038/s41557-021-00839-3
Web of Science ID

WOS:000739779300002

Author(s)
Heidarsson, Petur O.
Mercadante, Davide
Sottini, Andrea
Nettels, Daniel
Borgia, Madeleine B.
Borgia, Alessandro
Kilic, Sinan  
Fierz, Beat  
Best, Robert B.
Schuler, Benjamin
Date Issued

2022-01-06

Publisher

NATURE PORTFOLIO

Published in
Nature Chemistry
Volume

14

Start page

224

End page

231

Subjects

Chemistry, Multidisciplinary

•

Chemistry

•

single-molecule fret

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prothymosin-alpha

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h1-nucleosome interactions

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chromatin-structure

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energy-transfer

•

binding

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dna

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h1

•

dynamics

•

complexes

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LCBM  
Available on Infoscience
January 31, 2022
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/185044
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