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research article

Automatic simulation of electrochemical sensors by machine learning for drugs quantification

Du, Lin  
•
Thoma, Yann
•
Rodino, Francesca  
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July 1, 2024
Electrochimica Acta

Multiple drug concentrations concurrent detection and quantification based on electrochemical sensors are of great importance for therapeutic drug monitoring (TDM) and the development of personalized therapy. Cyclic voltammogram (CV) results obtained by electrochemical sensors can be used to offer quantitative information about drug concentrations. Several approaches have been proposed for single -concentration quantification based on CV results and machine learning (ML) models with lower training difficulty. However, insufficient measured dataset hinders the application of diverse large-scale ML algorithms in this field. A new method for automatic parameter estimation by ML of measured CV samples is here illustrated with the aim to generate a large simulated dataset for generalized drug concentration quantification model training in this paper. We present an ML -based approach that combines k -means clustering, polynomial regression, and Gaussian Mixture Model (GMM), which automates parameter estimation and simulation using peak detection, baseline subtraction, and peak Gaussian fitting with a small number of measurements. Large simulation datasets constructed on the basis of the estimation results open the possibility of training ML models for more generalized drug concentration quantification. The simulated dataset is processed to assess the efficiency of the proposed method. The Mean Average Percentage Error (MAPE) was 0.32% for etoposide (ETO) and 4.78% for methotrexate (MTX).

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Type
research article
DOI
10.1016/j.electacta.2024.144304
Web of Science ID

WOS:001237914900001

Author(s)
Du, Lin  
Thoma, Yann
Rodino, Francesca  
Carrara, Sandro  
Date Issued

2024-07-01

Publisher

Pergamon-Elsevier Science Ltd

Published in
Electrochimica Acta
Volume

491

Article Number

144304

Subjects

Physical Sciences

•

Therapeutic Drug Monitoring

•

Machine Learning

•

Cyclic Voltammogram

•

Simulated Dataset Generation

•

Drug Concentration Quantification

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
SCI-STI-SC  
FunderGrant Number

Swiss National Science Foundation, Switzerland

200021_207900/1

Swiss National Science Foundation (SNF)

200021_207900

Available on Infoscience
June 19, 2024
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/208731
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