Phage selection of chemically stabilized alpha-helical peptide ligands
Short alpha-helical peptides stabilized by linkages between constituent amino acids offer an attractive format for ligand development. In recent years, a range of excellent ligands based on stabilized alpha-helices were generated by rational design using alpha-helical peptides of natural proteins as templates. Herein, we developed a method to engineer chemically stabilized alpha-helical ligands in a combinatorial fashion. In brief, peptides containing cysteines in position i and i + 4 are genetically encoded by phage display, the cysteines are modified with chemical bridges to impose alpha-helical conformations, and binders are isolated by affinity selection. We applied the strategy to affinity mature an alpha-helical peptide binding beta-catenin. We succeeded in developing ligands with K-d's as low as 5.2 nM, having >200-fold improved affinity. The strategy is generally applicable for affinity maturation of any alpha-helical peptide. Compared to hydrocarbon stapled peptides, the herein evolved thioether-bridged peptide ligands can be synthesized more easily, unnatural amino acids are required and the cyclization reaction is more efficient and yields no stereoisomers. A further advantage of the thioether-bridged peptide ligands is that they can be expressed recombinantly as fusion proteins.
Cite this item
Diderich, P., Bertoldo, D., Dessen, P., Khan, M. M., Pizzitola, I., Held, W., Huelsken, J., & Heinis, C. (2016). Phage selection of chemically stabilized alpha-helical peptide ligands. ACS Chemical Biology, 11(5), 1422–1427. https://doi.org/10.1021/acschembio.5b00963
Click Copy to copy the citation, or select the text manually.
Diderich_ACSChemBiol_2016_Preprint.pdf
Preprint
Submitted version (Preprint)
openaccess
967.36 KB
Adobe PDF
d3f081a41c1a1aebe4b19c75287e237f