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research article

From Bioinformatic Web Portals to Semantically Integrated Data Grid Networks

Budura, Adriana  
•
Cudré-Mauroux, Philippe  
•
Aberer, Karl  
2007
Future Generation Computer Systems

We propose a semi-automated method for redeploying bioinformatic databases indexed in a Web portal as a decentralized, semantically integrated and service-oriented Data Grid. We generate peer-to-peer schema mappings leveraging on cross-referenced instances and instance-based schema matching algorithms. Analyzing real-world data extracted from an existing portal, we show how a rather trivial combination of lexicographical measures with set distance measures yields surprisingly good results in practice. Finally, we propose data models for redeploying all instances, schemas and schema mappings in the Data Grid, relying on standard Semantic Web technologies.

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Type
research article
DOI
10.1016/j.future.2006.03.002
Web of Science ID

WOS:000245837600021

Author(s)
Budura, Adriana  
Cudré-Mauroux, Philippe  
Aberer, Karl  
Date Issued

2007

Published in
Future Generation Computer Systems
Volume

23

Issue

3

Start page

485

Subjects

NCCR-MICS/CL4

•

NCCR-MICS

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LSIR  
Available on Infoscience
January 8, 2007
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/238710
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