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  4. Influence of Long-range Electrostatic Treatments on the Folding of the N-terminal H4 Histone Tail Peptide
 
research article

Influence of Long-range Electrostatic Treatments on the Folding of the N-terminal H4 Histone Tail Peptide

Lins, Roberto
•
Rothlisberger, Ursula  
2006
Journal of Chemical Theory and Computation

A series of ca. 20-ns molecular dynamics simulation runs of the N-terminal H4 histone tail in its un- and tetraacetylated forms were performed using three different long-range electrostatic treatments namely, spherical-cutoff, reaction field, and particle mesh Ewald. Comparison of the dynamical properties of the peptide reveals that internal flexibility and sampling of the conformational space are heavily dependent on the chosen method. Among the three tested methods, the particle mesh Ewald treatment yields the least conformational variation and a structural stabilization tendency around the initially defined topological framework.

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Type
research article
DOI
10.1021/ct0501699
Web of Science ID

WOS:000236056600004

Author(s)
Lins, Roberto
Rothlisberger, Ursula  
Date Issued

2006

Published in
Journal of Chemical Theory and Computation
Volume

2

Issue

2

Start page

246

End page

250

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LCBC  
Available on Infoscience
June 21, 2006
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/231917
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