Repository logo

Infoscience

  • English
  • French
Log In
Logo EPFL, École polytechnique fédérale de Lausanne

Infoscience

  • English
  • French
Log In
  1. Home
  2. Academic and Research Output
  3. Journal articles
  4. Outlier-Robust Subsampling Techniques for Persistent Homology
 
research article

Outlier-Robust Subsampling Techniques for Persistent Homology

Stolz, Bernadette J.  
January 1, 2023
Journal of Machine Learning Research

In recent years, persistent homology (PH) has been successfully applied to real-world data in many different settings. Despite significant computational advances, PH algorithms do not yet scale to large datasets preventing interesting applications. One approach to address computational issues posed by PH is to select a set of landmarks by subsampling from the data. Currently, these landmark points are chosen either at random or using the maxmin algorithm. Neither is ideal as random selection tends to favour dense areas of the data while the maxmin algorithm is very sensitive to noise. Here, we propose a novel approach to select landmarks specifically for PH that preserves coarse topological information of the original dataset. Our method is motivated by the Mayer-Vietoris sequence and requires only local PH calculations thus enabling efficient computation. We test our landmarks on artificial data sets which contain different levels of noise and compare them to standard landmark selection techniques. We demonstrate that our landmark selection outperforms standard methods as well as a subsampling technique based on an outlier-robust version of the k-means algorithm for low sampling densities in noisy data with respect to robustness to outliers.

  • Details
  • Metrics
Type
research article
Web of Science ID

WOS:001111461300001

Author(s)
Stolz, Bernadette J.  
Date Issued

2023-01-01

Published in
Journal of Machine Learning Research
Volume

24

Subjects

Technology

•

Landmarks

•

Persistent Homology

•

Subsampling

•

Outliers

•

Noise

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPHESS  
FunderGrant Number

EPSRC

EP/R018472/1

L'Oreal-Unesco For Women In Science Fellowship

EPSRC and MRC

EP/G037280/1

Show more
Available on Infoscience
February 20, 2024
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/204471
Logo EPFL, École polytechnique fédérale de Lausanne
  • Contact
  • infoscience@epfl.ch

  • Follow us on Facebook
  • Follow us on Instagram
  • Follow us on LinkedIn
  • Follow us on X
  • Follow us on Youtube
AccessibilityLegal noticePrivacy policyCookie settingsEnd User AgreementGet helpFeedback

Infoscience is a service managed and provided by the Library and IT Services of EPFL. © EPFL, tous droits réservés