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research article

Promoter mutagenesis for fine-tuning expression of essential genes in Mycobacterium tuberculosis

Boldrin, Francesca
•
Degiacomi, Giulia
•
Serafini, Agnese
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2018
Microbial Biotechnology

A range of regulated gene expression systems has been developed for mycobacteria in the last few years to facilitate the study of essential genes, validate novel drug targets and evaluate their vulnerability. Among these, the TetR/Pip-OFF repressible promoter system was successfully used in several mycobacterial species both invitro and invivo. In the first version of the system, the repressible promoter was P-ptr, a strong Pip-repressible promoter of Streptomyces pristinaespiralis, which might hamper effective downregulation of genes with a low basal expression level. Here, we report an enhanced system that allows more effective control of genes expressed at low level. To this end, we subjected P-ptr to targeted mutagenesis and produced 16 different promoters with different strength. Three of them, weaker than the wild-type promoter, were selected and characterized showing that they can indeed improve the performances of TetR/Pip-OFF repressible system both invitro and invivo increasing its stringency. Finally, we used these promoters to construct a series of bacterial biosensors with different sensitivity to DprE1 inhibitors and developed a whole-cell screening assay to identify inhibitors of this enzyme.

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Type
research article
DOI
10.1111/1751-7915.12875
Web of Science ID

WOS:000418789600024

Author(s)
Boldrin, Francesca
Degiacomi, Giulia
Serafini, Agnese
Kolly, Gaelle S.
Ventura, Marcello
Sala, Claudia  
Provvedi, Roberta
Palu, Giorgio
Cole, Stewart T.  
Manganelli, Riccardo
Date Issued

2018

Publisher

Wiley

Published in
Microbial Biotechnology
Volume

11

Issue

1

Start page

238

End page

247

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
UPCOL  
Available on Infoscience
January 15, 2018
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/143995
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