A search for CP violation in D-0 -> (KSK+)-K-0 pi(-) and D-0 -> (KSK-)-K-0 pi(+) decays is reported. The search is performed using an unbinned model-independent method known as the energy test that probes local CP violation in the phase space of the decays. The data analysed correspond to an integrated luminosity of 5.4 fb(-1) collected in proton-proton collisions by the LHCb experiment at a centre-of-mass energy of root s = 13TeV, amounting to approximately 950 thousand and 620 thousand signal candidates for the D-0 -> (KSK-)-K-0 pi(+) and D-0 -> (KSK+)-K-0 pi(-) modes, respectively. The method is validated using D-0 -> K-pi(+)pi(-)pi(+) and D-0 -> K-S(0)pi(+)pi(-) decays, where CP-violating effects are expected to be negligible, and using background-enhanced regions of the signal decays. The results are consistent with CP symmetry in both the D-0 -> (KSK-)-K-0 pi(+) and the D-0 -> (KSK+)-K-0 pi(-) decays, with p-values for the hypothesis of no CP violation of 70% and 66%, respectively.