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research article

Dynamics of functional network organization through graph mixture learning

Ricchi, Ilaria  
•
Tarun, Anjali  
•
Maretic, Hermina Petric  
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May 15, 2022
Neuroimage

Understanding the organizational principles of human brain activity at the systems level remains a major challenge in network neuroscience. Here, we introduce a fully data-driven approach based on graph learning to extract meaningful repeating network patterns from regionally-averaged timecourses. We use the Graph Laplacian Mixture Model (GLMM), a generative model that treats functional data as a collection of signals expressed on multiple underlying graphs. By exploiting covariance between activity of brain regions, these graphs can be learned without resorting to structural information. To validate the proposed technique, we first apply it to task fMRI with a known experimental paradigm. The probability of each graph to occur at each time-point is found to be consistent with the task timing, while the spatial patterns associated to each epoch of the task are in line with previously established activation patterns using classical regression analysis. We further on apply the technique to resting state data, which leads to extracted graphs that correspond to well-known brain functional activation patterns. The GLMM allows to learn graphs entirely from the functional activity that, in practice, turn out to reveal high degrees of similarity to the structural connectome. The Default Mode Network (DMN) is always captured by the algorithm in the different tasks and resting state data. Therefore, we compare the states corresponding to this network within themselves and with structure. Overall, this method allows us to infer relevant functional brain networks without the need of structural connectome information. Moreover, we overcome the limitations of windowing the time sequences by feeding the GLMM with the whole functional signal and neglecting the focus on sub-portions of the signals.

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Type
research article
DOI
10.1016/j.neuroimage.2022.119037
Web of Science ID

WOS:000766272000011

Author(s)
Ricchi, Ilaria  
Tarun, Anjali  
Maretic, Hermina Petric  
Frossard, Pascal  
Van De Ville, Dimitri  
Date Issued

2022-05-15

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE

Published in
Neuroimage
Volume

252

Article Number

119037

Subjects

Neurosciences

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Neuroimaging

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Radiology, Nuclear Medicine & Medical Imaging

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Neurosciences & Neurology

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Radiology, Nuclear Medicine & Medical Imaging

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dynamic functional connectivity

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structure and function

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task fmri

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resting-state

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(meta)states

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default mode network

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brain connectivity

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resting-brain

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cortex

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states

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fluctuations

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architecture

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LTS4  
MIPLAB  
Available on Infoscience
March 28, 2022
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/186631
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