Publication:

Flash Melting Amorphous Ice: Electron Diffraction of Water in No Man's Land and Methods for Time-Resolved cryo-EM

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2025-06-03T14:05:45Z

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LND

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ISIC

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SB

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EPFL

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SB

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EPFL

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EPFL

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EDOC

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ETU

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EPFL

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A-9524-2017

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Sivula, Kevin

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datacite.rights

openaccess

dc.contributor.advisor

Lorenz, Ulrich

dc.contributor.author

Mowry, Nathan Junior

dc.date.accepted

2025

dc.date.accessioned

2025-02-19T08:43:11Z

dc.date.available

2025-02-19T08:43:11Z

dc.date.created

2025-02-19

dc.date.issued

2025

dc.date.modified

2025-05-28T08:07:19.068448Z

dc.description.abstract

The origins of the anomalous behavior of water are believed to lie in the deeply supercooled regime, where rapid crystallization has prevented further investigation, giving it the name no man's land.' This thesis uses a modified electron microscope to study this supercooled regime by flash melting amorphous ice. Water vapor is deposited onto a cryogenic sample in situ, flash melted by a heating laser and then probed using short electron pulses. This method developed to study 'no man's land' is then applied to the study of microsecond time-resolved cryo-electron microscopy to obtain the critical heating rate of amorphous ice. Finally, this method is used to show how it can overcome the problem of orientation bias proteins typically exhibit in cryo-electron microscopy. Chapter 1 provides the foundational information, including the questions that drive this research, followed by chapter 2, which gives the experimental details of the flash melting process.

Chapter 3 reveals the structure of liquid water for the entire temperature regime of no man's land.' It provides the first experimental application of using the flash melting process to study supercooled water. A shaped laser pulse is used to heat an amorphous ice sample to well defined temperatures and is then probed using electron diffraction with microsecond electron pulses. This temperature range has never been measured before. The results shed light on modern theories about the origin of the anomalous behaviors of water.

Chapter 4 describes the experiments used to measure the critical heating rate of water - the rate at which an amorphous ice sample must be warmed at to prevent crystallization. By shaping the heating laser pulses with differing leading-edge intensities, different heating rates can be obtained. The crystallization is then determined by using microsecond electron pulses to probe the sample while it is being heated. This experiment provides the microsecond time-resolved electron microscopy community with the rate at which a biological sample must be warmed at to prevent any detrimental effects due to crystallization.

Chapter 5 provides multiple flash melting techniques that can be used to overcome the problem of orientation bias of proteins in cryo-electron microscopy. Many proteins exhibit an orientation bias, limiting the number of viewing angles. It is shown that by in situ depositing thin layers of amorphous ice and/or using shaped heating laser pulses, the proteins can be redistributed, allowing for a more uniform angular distribution, overcoming preferred orientation.

Chapter 6 looks to the future possibilities of the flash melting process and how it can be used to further study supercooled water and microsecond time-resolved cryo-electron microscopy.

dc.description.sponsorship

LND

dc.identifier.doi

10.5075/epfl-thesis-11299

dc.identifier.uri

https://infoscience.epfl.ch/handle/20.500.14299/247098

dc.language.iso

en

dc.publisher

EPFL

dc.publisher.place

Lausanne

dc.size

148

dc.source

THESIS

dc.subject

time-resolved electron microscopy

dc.subject

flash melting

dc.subject

supercooled water

dc.subject

laser heating

dc.subject

cryo-electron microscopy

dc.subject

time-resolved electron microscopy

dc.title

Flash Melting Amorphous Ice: Electron Diffraction of Water in No Man's Land and Methods for Time-Resolved cryo-EM

dc.type

thesis::doctoral thesis

dspace.entity.type

Publication

epfl.thesis.doctoralSchool

EDCH

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SB

epfl.thesis.institute

ISIC

epfl.thesis.jury

Prof. Christoph Bostedt (président) ; Dr Ulrich Lorenz (directeur de thèse) ; Prof. Thomas Rizzo, Dr Sophie Meuret, Prof. Michel Orrit (rapporteurs)

epfl.thesis.number

11299

epfl.thesis.originalUnit

LND

epfl.thesis.publicDefenseYear

2025-02-27

epfl.writtenAt

EPFL

oaire.licenseCondition

N/A

oaire.version

http://purl.org/coar/version/c_be7fb7dd8ff6fe43

oairecerif.advisor.affiliation

EPFL

oairecerif.author.affiliation

EPFL

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