Fourier and wavelet transform analysis, a tool for visualising regular patterns in DNA
Dodin, G.; Vandergheynst, P.; Levoir, P.; Cordier, C.; Marcourt, L.
2000

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Abstract

A correlation function that compares each base in a DNA sequence to its various neighbours and which is subsequently processed by Fourier and wavelet transforms has been developed. The procedure has been applied to sequences from the human chromosome 22, to nef genes from various HIV clones and to myosin heavy chain DNA. It permits to readily visualize regular features in DNA which are related to the stability of heteroduplexes formed upon strand slippage.

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Title Fourier and wavelet transform analysis, a tool for visualising regular patterns in DNA
Author(s) Dodin, G. ; Vandergheynst, P. ; Levoir, P. ; Cordier, C. ; Marcourt, L.
Published in Journal of Theoretical Biology
Volume 206
Issue 3
Pages 323-326
Date 2000
Keywords
DOI https://doi.org/10.1006/jtbi.2000.2127
Other identifier(s) View record in Web of Science
DAR: 2170
Laboratories LTS2
Record Appears in Scientific production and competences > STI - School of Engineering > IEM - Institut d'Electricité et de Microtechnique > LTS2 - Signal Processing Laboratory 2
Peer-reviewed publications
Work produced at EPFL
Journal Articles
Published
Record creation date 2006-06-14

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