SpotCaliper: Fast Wavelet-Based Spot Detection with Accurate Size Estimation

Motivation: SpotCaliper is a novel wavelet-based image-analysis software providing a fast automatic detection scheme for circular patterns (spots), combined with the precise estimation of their size. It is implemented as an ImageJ plugin with a friendly user interface. The user is allowed to edit the results by modifying the measurements (in a semi-automated way), extract data for further analysis. The fine tuning of the detections includes the possibility of adjusting or removing the original detections, as well as adding further spots. Results: The main advantage of the software is its ability to capture the size of spots in a fast and accurate way.


Published in:
Bioinformatics, 32, 8, 1278–1280
Year:
2016
Publisher:
Oxford Journals
Laboratories:




 Record created 2016-08-23, last modified 2018-03-17

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