The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases
Bultet, Lisandra Aguilar; Aguilar Rodriguez, Jose; Ahrens, Christian H; Ahrne, Erik Lennart; Ai, Ni; Aimo, Lucila; Akalin, Altuna; Aleksiev, Tyanko; Alocci, Davide; Altenhoff, Adrian; Alves, Isabel; Ambrosini, Giovanna; Pedone, Pascale Anderle; Angelina, Paolo; Anisimova, Maria; Appel, Ron; Argoud-Puy, Ghislaine; Arnold, Konstantin; Arpat, Bulak; Artimo, Panu; Ascencao, Kelly; Auchincloss, Andrea; Axelsen, Kristian; Gerritsen, Vivienne Baillie; Bairoch, Amos; Barisal, Parit; Baratin, Delphine; Barbato, Alessandro; Barbie, Valerie; Barras, David; Barreiro, Maria; Barret, Sophie; Bastian, Frederic; Batista Neto, Teresa Manuela; Baudis, Michael; Beaudoing, Emmanuel; Beckmann, Jacques S.; Bekkar, Amel Kawter; Cammoun, Leila Ben Hamida; Benmohammed, Sara; Bernard, Madeleine; Bertelli, Claire; Bertoni, Martino; Bienert, Stefan; Bignucolo, Olivier; Bilbao, Aivett; Bilican, Adem; Blank, Diana; Blatter, Marie Claude; Blum, Lorenz; Bocquet, Jocelyne; Boeckmann, Brigitte; Bolleman, Jerven Tjalling; Bordoli, Lorenza; Bosshard, Lars; Boucher, Gerard; Bougueleret, Lydie; Boutet, Emmanuel; Bovigny, Christophe; Bratulic, Sinisa; Breuza, Lionel; Bridge, Alan James; Britan, Aurore; Brito, Francisco; Frazao, Josias Brito; Bruggmann, Remy; Bucher, Philipp; Burdet, Frederic; Burger, Lukas; Cabello, Elena Maria; Gomez, Ruben Martin Cabezon; Calderon, Sandra; Cannarozzi, Gina; Carl, Sarah; Casas, Cristina Casals; Catherinet, Sebastien; Perier, Rouayda Cavin; Charpilloz, Christophe; Chaskar, Prasad Datatray; Chen, Weihua; Pepe, Anush Chiappino; Chopard, Bastion; Chu, Hoi Yee; Civic, Natacha; Claassen, Manfred; Clottu, Sylvie; Colombo, Martino; Cosandier, Isabelle; Coudert, Elisabeth; Crespo, Isaac; Creus, Marc; Cuche, Beatrice; Cuendet, Michel A; Cusin, Isabelle; Daga, Neha; Daina, Antoine; Dauvillier, Jerome; David, Fabrice; Davydov, Iakov; Ferreira, Mariana De Sa Ricca Manadelo; De Beer, Tjaart; De Castro, Edouard; De Santana, Charles; Delafontaine, Julien; Delorenzi, Mauro; Delucinge Vivier, Celine; Demirel, Oemer; Derham, Robert; Dermitzakis, Emmanouil Manolis; Dib, Linda; Diene, Seydina; Dilek, Nahzli; Dilmi, Julian; Domagalski, Marcin Jakub; Dorier, Julien; Dornevil, Dolnide; Dousse, Aline; Dreos, Rene; Duchen, Pablo; Roggli, Paula Duck; Duperret, Isabelle Dupanloup; Durinx, Christine; Duvaud, Severine; Engler, Robin; Frkek, Scrap; Lopez, Pablo Escobar; Fstreicher, Anne; Excoffier, Laurent; Fabbretti, Roberto; Falcone, Jean-Luc; Falquet, Laurent; Famiglietti, Maria Livia; Ferreira, Anne-Maud; Feuermann, Marc; Filliettaz, Marc; Hegel, Volker; Foucal, Adrien; Franceschini, Andrea; Fucile, Geoffrey; Gaidatzis, Dimos; Garcia, Victor; Gasteiger, Elisabeth; Gateau, Alain; Gatti, Lorenzo; Gaudet, Pascale; Gaudinat, Arnaud; Gehant, Sebastien; Gfeller, David; Gharib, Walid H.; Ghraichy, Marie; Gidoin, Cindy; Gil, Manuel; Gleizes, Anne; Gobeill, Julien; Gonnet, Gaston; Gos, Arnaud; Gotz, Lou; Gouy, Alexandre; Grbic, Djordje; Groux, Romain; Gruaz Gumowski, Nadine; Grun, Delphine; Gschwind, Andreas; Guex, Nicolas; Gupta, Saumya; Getaz, Michael; Haake, Dennis; Haas, Juergen; Hatzimanikatis, Vassily; Heckel, Gerald; Gardiol, Daniel Federico Hernandez; Hinard, Valerie; Hinz, Ursula; Homicsko, Krisztian; Horlacher, Oliver; Hosseini, Sayed-Rzgar; Hotz, Hans-Rudolf; Hulo, Chantal; Hundsrucker, Christian; Ibberson, Mark; Ilmjarv, Sten; Ioannidis, Vassilios; Ioannidis, Panagiotis; Iseli, Christian; Ivanek, Robert; Iwaszkiewicz, Justyna; Jacquet, Philippe; Jacquot, Martin; Jagannathan, Vidhya; Jan, Maxime; Jensen, Jeffrey; Johansson, Maria U.; Johner, Niklaus; Jungo, Florence; Junier, Thomas; Kahraman, Abdullah; Katsantoni, Maria; Keller, Guillaume; Kerhornou, Arnaud; Khalid, Fahad; Klingbiel, Dirk; Kimljenovic, Andrea; Kriventseva, Evgenia; Kryuchkova, Nadezda; Kumar, Sunil; Kutalik, Zoltan; Kuznetsov, Dmitry; Kuzyakiv, Rostyslav; Lane, Lydie; Lara, Vicente; Ledesma, Leonardo; Leleu, Marion; Lemercier, Philippe; Lew, Daniel; Lieberherr, Damien; Liechti, Robin; Lisacek, Frederique; Fischer, Heidi; Litsios, Glenn; Liu, Jialin; Lombardot, Thierry; Mace, Aurelien; Maffioletti, Sergio; Mahi, Mohamed-Ali; Maiolo, Massimo; Majjigapu, Somi Reddy; Malmstrom, Lars; Mangold, Veronique; Marek, Diana; Mariethoz, Julien; Marin, Ray; Martin, Olivier; Martin, Xavier; Martin-Campos, Trinidad; Mary, Camille; Masclaux, Frederic; Masson, Patrick; Meier, Cecile; Messina, Antonio; Lenoir, Muriel Metrailler; Meyer, Xavier; Michel, Pierre-Andre; Michielin, Olivier; Milanese, Alessi; Missiaglia, Edoardo; Perez, Jorge Molina; Caria, Vanessa Monteiro; Moret, Philippe; Moretti, Sebastien; Morgat, Anne; Mottaz, Anais; Mottin, Luc; Mouscaz, Yoann; Mueller, Markus; Murri, Riccardo; Mylonas, Roman; Neuenschwander, Samuel; Nikitin, Frederic; Niknejad, Anne; Nouspikel, Nevila; Nso, Lydie Nso; Okoniewski, Michal; Omasits, Ulrich; Paccaud, Benjamin; Pachkov, Mikhail; Paesano, Salvo Giacomo; Pagni, Marco; Palagi, Patricia M; Pasche, Emilie; Payne, Joshua L; Pedruzzi, Ivo; Peischl, Stephan; Peitsch, Manuel; Perlini, Sabine; Pilbout, Sandrine; Podvinec, Michael; Pohlmann, Rainer; Polizzi, Davide; Potter, Douglas; Poux, Sylvain; Pozzato, Monica; Pradervand, Sylvain; Praz, Viviane; Pruess, Manuela; Pujadas, Eva; Racle, Julien; Raschi, Marcelo; Ratib, Osman; Rausell, Antonio; De Laval, Valentine Rech; Redaschi, Nicole; Rempfer, Christine; Ren, Guangpeng; Vandati, Reza Ali Rezaee; Rib, Leonor; Grognuz, Oksana Riba; Altimiras, Emma Ricart; Rivoire, Catherine; Robin, Thibault; Robinson Rechavi, Marc; Rodrigues, Joao; Roechert, Bernd; Roelli, Patrick; Romano, Valentina; Rossier, Gregoire; Roth, Alexander; Rougemont, Jacques; Roux, Julien; Royo, Helene; Ruch, Patrick; Ruinelli, Michela; Rustom, Mohamad; Sates, Abdul; Roehrig, Ute F; Rueeger, Sina; Salamin, Nicolas; Sankar, Martial; Sarkar, Namrata; Saxenhofer, Moritz; Schaeffer, Mathieu; Schaerli, Yolanda; Schaper, Eike; Schmid, Annette; Schmid, Emanuel; Schmid, Christoph; Schmid, Michael; Schmidt, Sebastian; Schmocker, Daniel; Schneider, Michel; Schuepbach, Thierry; Schwede, Torsten; Schuetz, Frederic; Sengstag, Thierry; Serrano, Martha; Sethi, Atul; Shahmirzadi, Omid; Sigrist, Christian; Silvestro, Daniele; Simao Neto, Felipe Aristides; Simillion, Cedric; Simonovic, Milan; Skunca, Nives; Sluzek, Kasia; Soneson, Charlotte; Sprouffske, Kathleen; Stadler, Michael; Staehli, Sylvie; Stevenson, Brian; Stockinger, Heinz; Straszewski, Jakub; Stricker, Thomas; Studer, Gabriel; Stutz, Andre; Suffiotti, Madeleine; Sundaram, Shyamala; Szklarczyk, Damian; Szovenyi, Peter; Tegenfeldt, Fredrik; Teixeira, Daniel; Tellenbach, Susanne; Smith, Adam Alexander Thil; Tognolli, Michael; Topolsky, Ivan; Thuong Van Du, Tran; Tsantoulis, Petros; Tzika, Athanasia C.; Agote, Asier Ullate; Van Nimwegen, Erik; Von Mering, Christian; Varadarajan, Adithi; Veranneman, Maren; Verbregue, Lance; Veuthey, Anne-Lise; Vishnyakova, Dina; Vyas, Rounak; Wagner, Andreas; Walther, Daniel; Wan, Hon Wai; Wang, Mingcong; Waterhouse, Robert; Waterhouse, Andrew; Wicki, Adrian; Wigger, Leonore; Wirapati, Pratyaksha; Witschi, Ursula; Wyder, Stefan; Wyler, Kurt; Wuethrich, Daniel; Xenarios, Ioannis; Yamada, Kana; Yan, Zheng; Yasrebi, Haleh; Zahn, Monique; Zangger, Nadine; Zdobnov, Evgeny; Zerzion, Daniel; Zoete, Vincent; Zoller, Stefan; SIB Swiss Inst Bioinformatics
2016
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Abstract
The SIB Swiss Institute of Bioinformatics (www.isb-sib.ch) provides world-class bioinformatics databases, software tools, services and training to the international life science community in academia and industry. These solutions allow life scientists to turn the exponentially growing amount of data into knowledge. Here, we provide an overview of SIB's resources and competence areas, with a strong focus on curated databases and SIB's most popular and widely used resources. In particular, SIB's Bioinformatics resource portal ExPASy features over 150 resources, including UniProtKB/Swiss-Prot, ENZYME, PROSITE, neXtProt, STRING, UniCarbKB, SugarBindDB, SwissRegulon, EPD, arrayMap, Bgee, SWISS-MODEL Repository, OMA, OrthoDB and other databases, which are briefly described in this article.
Details
Title
The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases
Author(s)
Bultet, Lisandra Aguilar ; Aguilar Rodriguez, Jose ; Ahrens, Christian H ; Ahrne, Erik Lennart ; Ai, Ni ; Aimo, Lucila ; Akalin, Altuna ; Aleksiev, Tyanko ; Alocci, Davide ; Altenhoff, Adrian ; Alves, Isabel ; Ambrosini, Giovanna ; Pedone, Pascale Anderle ; Angelina, Paolo ; Anisimova, Maria ; Appel, Ron ; Argoud-Puy, Ghislaine ; Arnold, Konstantin ; Arpat, Bulak ; Artimo, Panu ; Ascencao, Kelly ; Auchincloss, Andrea ; Axelsen, Kristian ; Gerritsen, Vivienne Baillie ; Bairoch, Amos ; Barisal, Parit ; Baratin, Delphine ; Barbato, Alessandro ; Barbie, Valerie ; Barras, David ; Barreiro, Maria ; Barret, Sophie ; Bastian, Frederic ; Batista Neto, Teresa Manuela ; Baudis, Michael ; Beaudoing, Emmanuel ; Beckmann, Jacques S. ; Bekkar, Amel Kawter ; Cammoun, Leila Ben Hamida ; Benmohammed, Sara ; Bernard, Madeleine ; Bertelli, Claire ; Bertoni, Martino ; Bienert, Stefan ; Bignucolo, Olivier ; Bilbao, Aivett ; Bilican, Adem ; Blank, Diana ; Blatter, Marie Claude ; Blum, Lorenz ; Bocquet, Jocelyne ; Boeckmann, Brigitte ; Bolleman, Jerven Tjalling ; Bordoli, Lorenza ; Bosshard, Lars ; Boucher, Gerard ; Bougueleret, Lydie ; Boutet, Emmanuel ; Bovigny, Christophe ; Bratulic, Sinisa ; Breuza, Lionel ; Bridge, Alan James ; Britan, Aurore ; Brito, Francisco ; Frazao, Josias Brito ; Bruggmann, Remy ; Bucher, Philipp ; Burdet, Frederic ; Burger, Lukas ; Cabello, Elena Maria ; Gomez, Ruben Martin Cabezon ; Calderon, Sandra ; Cannarozzi, Gina ; Carl, Sarah ; Casas, Cristina Casals ; Catherinet, Sebastien ; Perier, Rouayda Cavin ; Charpilloz, Christophe ; Chaskar, Prasad Datatray ; Chen, Weihua ; Pepe, Anush Chiappino ; Chopard, Bastion ; Chu, Hoi Yee ; Civic, Natacha ; Claassen, Manfred ; Clottu, Sylvie ; Colombo, Martino ; Cosandier, Isabelle ; Coudert, Elisabeth ; Crespo, Isaac ; Creus, Marc ; Cuche, Beatrice ; Cuendet, Michel A ; Cusin, Isabelle ; Daga, Neha ; Daina, Antoine ; Dauvillier, Jerome ; David, Fabrice ; Davydov, Iakov ; Ferreira, Mariana De Sa Ricca Manadelo ; De Beer, Tjaart ; De Castro, Edouard ; De Santana, Charles ; Delafontaine, Julien ; Delorenzi, Mauro ; Delucinge Vivier, Celine ; Demirel, Oemer ; Derham, Robert ; Dermitzakis, Emmanouil Manolis ; Dib, Linda ; Diene, Seydina ; Dilek, Nahzli ; Dilmi, Julian ; Domagalski, Marcin Jakub ; Dorier, Julien ; Dornevil, Dolnide ; Dousse, Aline ; Dreos, Rene ; Duchen, Pablo ; Roggli, Paula Duck ; Duperret, Isabelle Dupanloup ; Durinx, Christine ; Duvaud, Severine ; Engler, Robin ; Frkek, Scrap ; Lopez, Pablo Escobar ; Fstreicher, Anne ; Excoffier, Laurent ; Fabbretti, Roberto ; Falcone, Jean-Luc ; Falquet, Laurent ; Famiglietti, Maria Livia ; Ferreira, Anne-Maud ; Feuermann, Marc ; Filliettaz, Marc ; Hegel, Volker ; Foucal, Adrien ; Franceschini, Andrea ; Fucile, Geoffrey ; Gaidatzis, Dimos ; Garcia, Victor ; Gasteiger, Elisabeth ; Gateau, Alain ; Gatti, Lorenzo ; Gaudet, Pascale ; Gaudinat, Arnaud ; Gehant, Sebastien ; Gfeller, David ; Gharib, Walid H. ; Ghraichy, Marie ; Gidoin, Cindy ; Gil, Manuel ; Gleizes, Anne ; Gobeill, Julien ; Gonnet, Gaston ; Gos, Arnaud ; Gotz, Lou ; Gouy, Alexandre ; Grbic, Djordje ; Groux, Romain ; Gruaz Gumowski, Nadine ; Grun, Delphine ; Gschwind, Andreas ; Guex, Nicolas ; Gupta, Saumya ; Getaz, Michael ; Haake, Dennis ; Haas, Juergen ; Hatzimanikatis, Vassily ; Heckel, Gerald ; Gardiol, Daniel Federico Hernandez ; Hinard, Valerie ; Hinz, Ursula ; Homicsko, Krisztian ; Horlacher, Oliver ; Hosseini, Sayed-Rzgar ; Hotz, Hans-Rudolf ; Hulo, Chantal ; Hundsrucker, Christian ; Ibberson, Mark ; Ilmjarv, Sten ; Ioannidis, Vassilios ; Ioannidis, Panagiotis ; Iseli, Christian ; Ivanek, Robert ; Iwaszkiewicz, Justyna ; Jacquet, Philippe ; Jacquot, Martin ; Jagannathan, Vidhya ; Jan, Maxime ; Jensen, Jeffrey ; Johansson, Maria U. ; Johner, Niklaus ; Jungo, Florence ; Junier, Thomas ; Kahraman, Abdullah ; Katsantoni, Maria ; Keller, Guillaume ; Kerhornou, Arnaud ; Khalid, Fahad ; Klingbiel, Dirk ; Kimljenovic, Andrea ; Kriventseva, Evgenia ; Kryuchkova, Nadezda ; Kumar, Sunil ; Kutalik, Zoltan ; Kuznetsov, Dmitry ; Kuzyakiv, Rostyslav ; Lane, Lydie ; Lara, Vicente ; Ledesma, Leonardo ; Leleu, Marion ; Lemercier, Philippe ; Lew, Daniel ; Lieberherr, Damien ; Liechti, Robin ; Lisacek, Frederique ; Fischer, Heidi ; Litsios, Glenn ; Liu, Jialin ; Lombardot, Thierry ; Mace, Aurelien ; Maffioletti, Sergio ; Mahi, Mohamed-Ali ; Maiolo, Massimo ; Majjigapu, Somi Reddy ; Malmstrom, Lars ; Mangold, Veronique ; Marek, Diana ; Mariethoz, Julien ; Marin, Ray ; Martin, Olivier ; Martin, Xavier ; Martin-Campos, Trinidad ; Mary, Camille ; Masclaux, Frederic ; Masson, Patrick ; Meier, Cecile ; Messina, Antonio ; Lenoir, Muriel Metrailler ; Meyer, Xavier ; Michel, Pierre-Andre ; Michielin, Olivier ; Milanese, Alessi ; Missiaglia, Edoardo ; Perez, Jorge Molina ; Caria, Vanessa Monteiro ; Moret, Philippe ; Moretti, Sebastien ; Morgat, Anne ; Mottaz, Anais ; Mottin, Luc ; Mouscaz, Yoann ; Mueller, Markus ; Murri, Riccardo ; Mylonas, Roman ; Neuenschwander, Samuel ; Nikitin, Frederic ; Niknejad, Anne ; Nouspikel, Nevila ; Nso, Lydie Nso ; Okoniewski, Michal ; Omasits, Ulrich ; Paccaud, Benjamin ; Pachkov, Mikhail ; Paesano, Salvo Giacomo ; Pagni, Marco ; Palagi, Patricia M ; Pasche, Emilie ; Payne, Joshua L ; Pedruzzi, Ivo ; Peischl, Stephan ; Peitsch, Manuel ; Perlini, Sabine ; Pilbout, Sandrine ; Podvinec, Michael ; Pohlmann, Rainer ; Polizzi, Davide ; Potter, Douglas ; Poux, Sylvain ; Pozzato, Monica ; Pradervand, Sylvain ; Praz, Viviane ; Pruess, Manuela ; Pujadas, Eva ; Racle, Julien ; Raschi, Marcelo ; Ratib, Osman ; Rausell, Antonio ; De Laval, Valentine Rech ; Redaschi, Nicole ; Rempfer, Christine ; Ren, Guangpeng ; Vandati, Reza Ali Rezaee ; Rib, Leonor ; Grognuz, Oksana Riba ; Altimiras, Emma Ricart ; Rivoire, Catherine ; Robin, Thibault ; Robinson Rechavi, Marc ; Rodrigues, Joao ; Roechert, Bernd ; Roelli, Patrick ; Romano, Valentina ; Rossier, Gregoire ; Roth, Alexander ; Rougemont, Jacques ; Roux, Julien ; Royo, Helene ; Ruch, Patrick ; Ruinelli, Michela ; Rustom, Mohamad ; Sates, Abdul ; Roehrig, Ute F ; Rueeger, Sina ; Salamin, Nicolas ; Sankar, Martial ; Sarkar, Namrata ; Saxenhofer, Moritz ; Schaeffer, Mathieu ; Schaerli, Yolanda ; Schaper, Eike ; Schmid, Annette ; Schmid, Emanuel ; Schmid, Christoph ; Schmid, Michael ; Schmidt, Sebastian ; Schmocker, Daniel ; Schneider, Michel ; Schuepbach, Thierry ; Schwede, Torsten ; Schuetz, Frederic ; Sengstag, Thierry ; Serrano, Martha ; Sethi, Atul ; Shahmirzadi, Omid ; Sigrist, Christian ; Silvestro, Daniele ; Simao Neto, Felipe Aristides ; Simillion, Cedric ; Simonovic, Milan ; Skunca, Nives ; Sluzek, Kasia ; Soneson, Charlotte ; Sprouffske, Kathleen ; Stadler, Michael ; Staehli, Sylvie ; Stevenson, Brian ; Stockinger, Heinz ; Straszewski, Jakub ; Stricker, Thomas ; Studer, Gabriel ; Stutz, Andre ; Suffiotti, Madeleine ; Sundaram, Shyamala ; Szklarczyk, Damian ; Szovenyi, Peter ; Tegenfeldt, Fredrik ; Teixeira, Daniel ; Tellenbach, Susanne ; Smith, Adam Alexander Thil ; Tognolli, Michael ; Topolsky, Ivan ; Thuong Van Du, Tran ; Tsantoulis, Petros ; Tzika, Athanasia C. ; Agote, Asier Ullate ; Van Nimwegen, Erik ; Von Mering, Christian ; Varadarajan, Adithi ; Veranneman, Maren ; Verbregue, Lance ; Veuthey, Anne-Lise ; Vishnyakova, Dina ; Vyas, Rounak ; Wagner, Andreas ; Walther, Daniel ; Wan, Hon Wai ; Wang, Mingcong ; Waterhouse, Robert ; Waterhouse, Andrew ; Wicki, Adrian ; Wigger, Leonore ; Wirapati, Pratyaksha ; Witschi, Ursula ; Wyder, Stefan ; Wyler, Kurt ; Wuethrich, Daniel ; Xenarios, Ioannis ; Yamada, Kana ; Yan, Zheng ; Yasrebi, Haleh ; Zahn, Monique ; Zangger, Nadine ; Zdobnov, Evgeny ; Zerzion, Daniel ; Zoete, Vincent ; Zoller, Stefan ; SIB Swiss Inst Bioinformatics
Published in
Nucleic Acids Research
Pagination
11
Volume
44
Issue
D1
Pages
D27-D37
Date
2016
Publisher
Oxford, Oxford University Press
ISSN
0305-1048
Other identifier(s)
View record in Web of Science
Laboratories
LCSB
Record Appears in
Scientific production and competences > SB - School of Basic Sciences > ISIC - Institute of Chemical Sciences and Engineering > LCSB - Laboratory of Computational Systems Biotechnology
Peer-reviewed publications
Work outside EPFL
Journal Articles
Published
Peer-reviewed publications
Work outside EPFL
Journal Articles
Published
Record creation date
2016-04-01