SABRE: A Tool for Stochastic Analysis of Biochemical Reaction Networks
Didier, Frederic; Henzinger, Thomas A.; Mateescu, Maria; Wolf, Verena
2010

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Abstract

The importance of stochasticity within biological systems has been shown repeatedly during the last years and has raised the need for efficient stochastic tools. We present SABRE, a tool for stochastic analysis of biochemical reaction networks. SABRE implements fast adaptive uniformization, a direct numerical approximation algorithm for computing transient solutions of biochemical reaction networks. In addition to the stochastic analysis, SABRE may also conduct deterministic analysis.

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Title SABRE: A Tool for Stochastic Analysis of Biochemical Reaction Networks
Author(s) Didier, Frederic ; Henzinger, Thomas A. ; Mateescu, Maria ; Wolf, Verena
Published in 2010 Seventh International Conference on the Quantitative Evaluation of Systems
Pages 193-194
Conference 2010 Seventh International Conference on the Quantitative Evaluation of Systems (QEST), Williamsburg, VA, USA, 15-18 09 2010
Date 2010
Publisher IEEE
DOI https://doi.org/10.1109/QEST.2010.33
Laboratories MTC
Record Appears in Scientific production and competences > I&C - School of Computer and Communication Sciences > IC Archives > MTC - Models and Theory of Computation Laboratory
Conference Papers
Work produced at EPFL
Published
Record creation date 2011-03-01

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