The Microbe browser for comparative genomics
Gattiker, Alexandre; Dessimoz, Christophe; Schneider, Adrian; Xenarios, Ioannis; Pagni, Marco; Rougemont, Jacques
2009

Files

Abstract

The Microbe browser is a web server providing comparative microbial genomics data. It offers comprehensive, integrated data from GenBank, RefSeq, UniProt, InterPro, Gene Ontology and the Orthologs Matrix Project (OMA) database, displayed along with gene predictions from five software packages. The Microbe browser is daily updated from the source databases and includes all completely sequenced bacterial and archaeal genomes. The data are displayed in an easy-to-use, interactive website based on Ensembl software. The Microbe browser is available at http://microbe.vital-it.ch/. Programmatic access is available through the OMA application programming interface (API) at http://microbe.vital-it.ch/api.

Details

Title The Microbe browser for comparative genomics
Author(s) Gattiker, Alexandre ; Dessimoz, Christophe ; Schneider, Adrian ; Xenarios, Ioannis ; Pagni, Marco ; Rougemont, Jacques
Published in Nucleic Acids Research
Volume 37
Issue 2
Pages W296-W299
Date 2009
Publisher Oxford University Press
ISSN 0305-1048
Keywords
DOI https://doi.org/10.1093/nar/gkp268
Other identifier(s) View record in Web of Science
Laboratories SV
Record Appears in Scientific production and competences > Unattributed publications > SV - SV - Unattributed publications
Scientific production and competences > SV - School of Life Sciences > SV - Unattributed publications
Peer-reviewed publications
Work produced at EPFL
Journal Articles
Published
Record creation date 2010-11-30

PDF