000114912 001__ 114912
000114912 005__ 20190316234108.0
000114912 0247_ $$2doi$$a10.1093/nar/gkj146
000114912 037__ $$aARTICLE
000114912 245__ $$aEPD in its twentieth year: towards complete promoter coverage of selected model organisms
000114912 269__ $$a2006
000114912 260__ $$c2006
000114912 336__ $$aJournal Articles
000114912 520__ $$aThe Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters, experimentally defined by a transcription start site (TSS). Access to promoter sequences is provided by pointers to positions in the corresponding genomes. Promoter evidence comes from conventional TSS mapping experiments for individual genes, or, starting from release 73, from mass genome annotation projects. Subsets of promoter sequences with customized 5' and 3' extensions can be downloaded from the EPD website. The focus of current development efforts is to reach complete promoter coverage for important model organisms as soon as possible. To speed up this process, a new class of preliminary promoter entries has been introduced as of release 83, which requires less stringent admission criteria. As part of a continuous integration process, new web-based interfaces have been developed, which allow joint analysis of promoter sequences with other bioinformatics resources developed by our group, in particular programs offered by the Signal Search Analysis Server, and gene expression data stored in the CleanEx database. EPD can be accessed at http://www.epd.isb-sib.ch.
000114912 700__ $$aSchmid, C. D.
000114912 700__ $$aPerier, R.
000114912 700__ $$aPraz, V.
000114912 700__ $$0244404$$aBucher, P.$$g113607
000114912 773__ $$j34$$kSuppl 1$$qD82-5$$tNucleic Acids Res
000114912 8564_ $$s436131$$uhttps://infoscience.epfl.ch/record/114912/files/Nucl.%20Acids%20Res.-2006-Schmid-D82-5.pdf$$yPublisher's version$$zPublisher's version
000114912 909C0 $$0252244$$pGR-BUCHER$$xU11780
000114912 909CO $$ooai:infoscience.tind.io:114912$$pSV$$particle$$qGLOBAL_SET
000114912 917Z8 $$x182396
000114912 937__ $$aGR-BUCHER-ARTICLE-2006-005
000114912 973__ $$aOTHER$$rREVIEWED$$sPUBLISHED
000114912 980__ $$aARTICLE