000114903 001__ 114903
000114903 005__ 20190316234108.0
000114903 0247_ $$2doi$$a10.1093/nar/gkh067
000114903 037__ $$aARTICLE
000114903 245__ $$atrome, trEST and trGEN: databases of predicted protein sequences
000114903 269__ $$a2004
000114903 260__ $$c2004
000114903 336__ $$aJournal Articles
000114903 500__ $$aSwiss Institute of Bioinformatics, Ludwig Institute for Cancer Research, Chemin des Boveresses 155, 1066 Epalinges s/Lausanne, Switzerland. peter.sperisen@isb-sib.ch
000114903 520__ $$aWe previously introduced two new protein databases (trEST and trGEN) of hypothetical protein sequences predicted from EST and HTG sequences, respectively. Here, we present the updates made on these two databases plus a new database (trome), which uses alignments of EST data to HTG or full genomes to generate virtual transcripts and coding sequences. This new database is of higher quality and since it contains the information in a much denser format it is of much smaller size. These new databases are in a Swiss-Prot-like format and are updated on a weekly basis (trEST and trGEN) or every 3 months (trome). They can be downloaded by anonymous ftp from ftp://ftp.isrec.isb-sib.ch/pub/databases.
000114903 700__ $$aSperisen, P.
000114903 700__ $$aIseli, C.
000114903 700__ $$aPagni, M.
000114903 700__ $$aStevenson, B. J.
000114903 700__ $$0244404$$g113607$$aBucher, P.
000114903 700__ $$aJongeneel, C. V.
000114903 773__ $$j32$$tNucleic Acids Res$$kSuppl 1$$qD509-11
000114903 8564_ $$uhttps://infoscience.epfl.ch/record/114903/files/Nucl.%20Acids%20Res.-2004-Sperisen-D509-11.pdf$$zPublisher's version$$s52789$$yPublisher's version
000114903 909C0 $$xU11780$$0252244$$pGR-BUCHER
000114903 909CO $$ooai:infoscience.tind.io:114903$$qGLOBAL_SET$$pSV$$particle
000114903 917Z8 $$x182396
000114903 937__ $$aGR-BUCHER-ARTICLE-2004-005
000114903 973__ $$rREVIEWED$$sPUBLISHED$$aOTHER
000114903 980__ $$aARTICLE