000114893 001__ 114893
000114893 005__ 20190316234108.0
000114893 0247_ $$2doi$$a10.1093/nar/gkg611
000114893 037__ $$aARTICLE
000114893 245__ $$aSignal search analysis server
000114893 269__ $$a2003
000114893 260__ $$c2003
000114893 336__ $$aJournal Articles
000114893 500__ $$aISREC Swiss Institute for Experimental Cancer Research, Ch. des Boveresses 155, 1066 Epalinges s/ Lausanne, VD, Switzerland.
000114893 520__ $$aSignal search analysis is a general method to discover and characterize sequence motifs that are positionally correlated with a functional site (e.g. a transcription or translation start site). The method has played an instrumental role in the analysis of eukaryotic promoter elements. The signal search analysis server provides access to four different computer programs as well as to a large number of precompiled functional site collections. The programs offered allow: (i) the identification of non-random sequence regions under evolutionary constraint; (ii) the detection of consensus sequence-based motifs that are over- or under-represented at a particular distance from a functional site; (iii) the analysis of the positional distribution of a consensus sequence- or weight matrix-based sequence motif around a functional site; and (iv) the optimization of a weight matrix description of a locally over-represented sequence motif. These programs can be accessed at: http://www.isrec.isb-sib.ch/ssa/.
000114893 700__ $$0243605$$g176602$$aAmbrosini, G.
000114893 700__ $$aPraz, V.
000114893 700__ $$aJagannathan, V.
000114893 700__ $$aBucher, P.$$g113607$$0244404
000114893 773__ $$j31$$tNucleic Acids Res$$k13$$q3618-20
000114893 8564_ $$uhttps://infoscience.epfl.ch/record/114893/files/Nucl.%20Acids%20Res.-2003-Ambrosini-3618-20.pdf$$zPublisher's version$$s210927$$yPublisher's version
000114893 909C0 $$xU11780$$0252244$$pGR-BUCHER
000114893 909CO $$qGLOBAL_SET$$pSV$$ooai:infoscience.tind.io:114893$$particle
000114893 917Z8 $$x182396
000114893 937__ $$aGR-BUCHER-ARTICLE-2003-001
000114893 973__ $$rREVIEWED$$sPUBLISHED$$aOTHER
000114893 980__ $$aARTICLE