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  4. Exciton decay mechanism in DNA single strands: back-electron transfer and ultrafast base motions
 
research article

Exciton decay mechanism in DNA single strands: back-electron transfer and ultrafast base motions

Bauer, Benjamin  
•
Sharma, Rahul  
•
Chergui, Majed  
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April 19, 2022
Chemical Science

The photochemistry of DNA systems is characterized by the ultraviolet (UV) absorption of pi-stacked nucleobases, resulting in exciton states delocalized over several bases. As their relaxation sensitively depends on local stacking conformations, disentangling the ensuing electronic and structural dynamics has remained an experimental challenge, despite their fundamental role in protecting the genome from potentially harmful UV radiation. Here we use transient absorption and transient absorption anisotropy spectroscopy with broadband femtosecond deep-UV pulses (250-360 nm) to resolve the exciton dynamics of UV-excited adenosine single strands under physiological conditions. Due to the exceptional deep-UV bandwidth and polarization sensitivity of our experimental approach, we simultaneously resolve the population dynamics, charge-transfer (CT) character and conformational changes encoded in the UV transition dipoles of the pi-stacked nucleotides. Whilst UV excitation forms fully charge-separated CT excitons in less than 0.3 ps, we find that most decay back to the ground state via a back-electron transfer. Based on the anisotropy measurements, we propose that this mechanism is accompanied by a structural relaxation of the photoexcited base-stack, involving an inter-base rotation of the nucleotides. Our results finally complete the exciton relaxation mechanism for adenosine single strands and offer a direct view into the coupling of electronic and structural dynamics in aggregated photochemical systems.

  • Details
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Type
research article
DOI
10.1039/d1sc06450a
Web of Science ID

WOS:000784898200001

Author(s)
Bauer, Benjamin  
Sharma, Rahul  
Chergui, Majed  
Oppermann, Malte  
Date Issued

2022-04-19

Publisher

ROYAL SOC CHEMISTRY

Published in
Chemical Science
Volume

13

Issue

18

Start page

5230

End page

5242

Subjects

Chemistry, Multidisciplinary

•

Chemistry

•

charge-transfer

•

state dynamics

•

absorption-spectrum

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internal-conversion

•

proton-transfer

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adenine

•

stacking

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delocalization

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deactivation

•

excitation

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

Available on Infoscience
May 9, 2022
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/187608
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