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research article

CCAAT box revisited: bidirectionality, location and context

Bucher, P.  
•
Trifonov, E. N.
1988
Journal of Biomolecular Structure and Dynamics

The so-called CCAAT box is believed to be a major promoter element of higher eukaryotes though it is ill-defined being deduced from very limited sequence data. The comprehensive computer analysis of an unbiased set of 168 promoters presented here removes several of the persisting uncertainties. In particular, it delineates the region of preferential occurrence of the CCAAT element to -110 to -50 relative to the initiation site, suggests that integrity of this pentamer is essential, and confirms bidirectionality as a general property of this element. Within the above region the signal is found to occur in a specific sequence context which is an important supplement to its description.

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Type
research article
DOI
10.1080/07391102.1988.10506466
Author(s)
Bucher, P.  
Trifonov, E. N.
Date Issued

1988

Published in
Journal of Biomolecular Structure and Dynamics
Volume

5

Issue

6

Start page

1231

End page

1236

Note

Department of Polymer Research, Weizmann Institute of Science, Rehovot, Israel.

Editorial or Peer reviewed

REVIEWED

Written at

OTHER

EPFL units
GR-BUCHER  
Available on Infoscience
December 17, 2007
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/15649
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