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  4. Combining anatomical and functional networks for neuropathology identification: A case study on autism spectrum disorder
 
research article

Combining anatomical and functional networks for neuropathology identification: A case study on autism spectrum disorder

Itani, Sarah
•
Thanou, Dorina  
April 1, 2021
Medical Image Analysis

While the prevalence of Autism Spectrum Disorder (ASD) is increasing, research continues in an effort to identify common etiological and pathophysiological bases. In this regard, modern machine learning and network science pave the way for a better understanding of the neuropathology and the development of diagnosis aid systems. The present work addresses the classification of neurotypical and ASD subjects by combining knowledge about both the structure and the functional activity of the brain. In particular, we model the brain structure as a graph, and the resting-state functional MRI (rs-fMRI) signals as values that live on the nodes of that graph. We then borrow tools from the emerging field of Graph Signal Processing (GSP) to build features related to the frequency content of these signals. In order to make these features highly discriminative, we apply an extension of the Fukunaga-Koontz transform. Finally, we use these new markers to train a decision tree, an interpretable classification scheme, which results in a final diagnosis aid model. Interestingly, the resulting decision tree outperforms state-of-the-art methods on the publicly available Autism Brain Imaging Data Exchange (ABIDE) collection. Moreover, the analysis of the predictive markers reveals the influence of the frontal and temporal lobes in the diagnosis of the disorder, which is in line with previous findings in the literature of neuroscience. Our results indicate that exploiting jointly structural and functional information of the brain can reveal important information about the complexity of the neuropathology.

(c) 2021 Elsevier B.V. All rights reserved.

  • Details
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Type
research article
DOI
10.1016/j.media.2021.101986
Web of Science ID

WOS:000639623300002

Author(s)
Itani, Sarah
•
Thanou, Dorina  
Date Issued

2021-04-01

Publisher

ELSEVIER

Published in
Medical Image Analysis
Volume

69

Article Number

101986

Subjects

Computer Science, Artificial Intelligence

•

Computer Science, Interdisciplinary Applications

•

Engineering, Biomedical

•

Radiology, Nuclear Medicine & Medical Imaging

•

Computer Science

•

Engineering

•

graph signal processing

•

fmri

•

autism spectrum disorder

•

explainable artificial intelligence

Editorial or Peer reviewed

REVIEWED

Written at

EPFL

EPFL units
LTS4  
Available on Infoscience
May 22, 2021
Use this identifier to reference this record
https://infoscience.epfl.ch/handle/20.500.14299/178225
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